EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0027974 (Gene tree)
Gene ID: -
Gene Symbol: Rpf1
Alias: 2210420E24Rik|2310066N05Rik|Bxdc5
Full Name: ribosome production factor 1 homolog
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 15441 bases
Position: chr3:150027950-150043390
Accession: 1917535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0064231	Brix	PF04427.18	8.3e-26	1	1
MGP_129S1SvImJ_P0064232	Brix	PF04427.18	6.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0064235	-	1978	-	MGP_129S1SvImJ_P0064235	212 (aa)	-	-
MGP_129S1SvImJ_T0064234	-	807	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064231	-	1661	XM_006502050	MGP_129S1SvImJ_P0064231	349 (aa)	XP_006502113	Q7TND5
MGP_129S1SvImJ_T0064233	-	813	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064232	-	1120	-	MGP_129S1SvImJ_P0064232	146 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0027974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027974	Rpf1	87	40.625	MGP_129S1SvImJ_G0015908	Imp4	71	37.321