EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0027988 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 26330 bases
Position: chr3:156062902-156089231
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0064321	KH_1	PF00013.29	7.1e-70	1	4
MGP_129S1SvImJ_P0064321	KH_1	PF00013.29	7.1e-70	2	4
MGP_129S1SvImJ_P0064321	KH_1	PF00013.29	7.1e-70	3	4
MGP_129S1SvImJ_P0064321	KH_1	PF00013.29	7.1e-70	4	4
MGP_129S1SvImJ_P0064318	KH_1	PF00013.29	2.2e-69	1	4
MGP_129S1SvImJ_P0064318	KH_1	PF00013.29	2.2e-69	2	4
MGP_129S1SvImJ_P0064318	KH_1	PF00013.29	2.2e-69	3	4
MGP_129S1SvImJ_P0064318	KH_1	PF00013.29	2.2e-69	4	4
MGP_129S1SvImJ_P0064325	KH_1	PF00013.29	2.2e-69	1	4
MGP_129S1SvImJ_P0064325	KH_1	PF00013.29	2.2e-69	2	4
MGP_129S1SvImJ_P0064325	KH_1	PF00013.29	2.2e-69	3	4
MGP_129S1SvImJ_P0064325	KH_1	PF00013.29	2.2e-69	4	4
MGP_129S1SvImJ_P0064322	KH_1	PF00013.29	2.4e-69	1	4
MGP_129S1SvImJ_P0064322	KH_1	PF00013.29	2.4e-69	2	4
MGP_129S1SvImJ_P0064322	KH_1	PF00013.29	2.4e-69	3	4
MGP_129S1SvImJ_P0064322	KH_1	PF00013.29	2.4e-69	4	4
MGP_129S1SvImJ_P0064320	KH_1	PF00013.29	2.4e-69	1	4
MGP_129S1SvImJ_P0064320	KH_1	PF00013.29	2.4e-69	2	4
MGP_129S1SvImJ_P0064320	KH_1	PF00013.29	2.4e-69	3	4
MGP_129S1SvImJ_P0064320	KH_1	PF00013.29	2.4e-69	4	4
MGP_129S1SvImJ_P0064319	KH_1	PF00013.29	7.6e-38	1	2
MGP_129S1SvImJ_P0064319	KH_1	PF00013.29	7.6e-38	2	2
MGP_129S1SvImJ_P0064328	KH_1	PF00013.29	1.1e-16	1	1
MGP_129S1SvImJ_P0064321	KH_2	PF07650.17	1.3e-22	1	2
MGP_129S1SvImJ_P0064321	KH_2	PF07650.17	1.3e-22	2	2
MGP_129S1SvImJ_P0064325	KH_2	PF07650.17	3.3e-22	1	2
MGP_129S1SvImJ_P0064325	KH_2	PF07650.17	3.3e-22	2	2
MGP_129S1SvImJ_P0064322	KH_2	PF07650.17	3.6e-22	1	2
MGP_129S1SvImJ_P0064322	KH_2	PF07650.17	3.6e-22	2	2
MGP_129S1SvImJ_P0064320	KH_2	PF07650.17	3.6e-22	1	2
MGP_129S1SvImJ_P0064320	KH_2	PF07650.17	3.6e-22	2	2
MGP_129S1SvImJ_P0064318	KH_2	PF07650.17	3.7e-22	1	2
MGP_129S1SvImJ_P0064318	KH_2	PF07650.17	3.7e-22	2	2
MGP_129S1SvImJ_P0064319	KH_2	PF07650.17	3.8e-10	1	1
MGP_129S1SvImJ_P0064328	KH_2	PF07650.17	5.2e-06	1	1
MGP_129S1SvImJ_P0064332	DUF1897	PF09005.10	1.7e-12	1	2
MGP_129S1SvImJ_P0064332	DUF1897	PF09005.10	1.7e-12	2	2
MGP_129S1SvImJ_P0064330	DUF1897	PF09005.10	2.1e-12	1	2
MGP_129S1SvImJ_P0064330	DUF1897	PF09005.10	2.1e-12	2	2
MGP_129S1SvImJ_P0064318	DUF1897	PF09005.10	2.4e-11	1	2
MGP_129S1SvImJ_P0064318	DUF1897	PF09005.10	2.4e-11	2	2
MGP_129S1SvImJ_P0064325	DUF1897	PF09005.10	2.5e-11	1	2
MGP_129S1SvImJ_P0064325	DUF1897	PF09005.10	2.5e-11	2	2
MGP_129S1SvImJ_P0064322	DUF1897	PF09005.10	2.5e-11	1	2
MGP_129S1SvImJ_P0064322	DUF1897	PF09005.10	2.5e-11	2	2
MGP_129S1SvImJ_P0064320	DUF1897	PF09005.10	2.6e-11	1	2
MGP_129S1SvImJ_P0064320	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0064327	-	435	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064326	-	4525	-	MGP_129S1SvImJ_P0064326	642 (aa)	-	-
MGP_129S1SvImJ_T0064325	-	2374	-	MGP_129S1SvImJ_P0064325	643 (aa)	-	-
MGP_129S1SvImJ_T0064324	-	4853	-	MGP_129S1SvImJ_P0064324	700 (aa)	-	-
MGP_129S1SvImJ_T0064323	-	2087	-	MGP_129S1SvImJ_P0064323	69 (aa)	-	-
MGP_129S1SvImJ_T0064322	-	2526	-	MGP_129S1SvImJ_P0064322	651 (aa)	-	-
MGP_129S1SvImJ_T0064321	-	3194	-	MGP_129S1SvImJ_P0064321	523 (aa)	-	-
MGP_129S1SvImJ_T0064320	-	2552	-	MGP_129S1SvImJ_P0064320	654 (aa)	-	-
MGP_129S1SvImJ_T0064333	-	5101	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064319	-	1040	-	MGP_129S1SvImJ_P0064319	306 (aa)	-	-
MGP_129S1SvImJ_T0064336	-	665	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064329	-	512	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064318	-	6547	XM_006501660	MGP_129S1SvImJ_P0064318	642 (aa)	XP_006501723	Q91WJ8
MGP_129S1SvImJ_T0064335	-	4019	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064332	-	830	-	MGP_129S1SvImJ_P0064332	156 (aa)	-	-
MGP_129S1SvImJ_T0064334	-	424	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064330	-	796	-	MGP_129S1SvImJ_P0064330	141 (aa)	-	-
MGP_129S1SvImJ_T0064328	-	585	-	MGP_129S1SvImJ_P0064328	149 (aa)	-	-
MGP_129S1SvImJ_T0064331	-	800	-	MGP_129S1SvImJ_P0064331	173 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0027988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0027988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0027988	Fubp1	72	33.019	MGP_129S1SvImJ_G0017390	Pcbp3	66	31.250
MGP_129S1SvImJ_G0027988	Fubp1	94	59.208	MGP_129S1SvImJ_G0025586	Fubp3	96	64.324
MGP_129S1SvImJ_G0027988	Fubp1	50	36.364	MGP_129S1SvImJ_G0019714	Nova1	57	36.364
MGP_129S1SvImJ_G0027988	Fubp1	96	64.410	MGP_129S1SvImJ_G0023949	Khsrp	70	67.654
MGP_129S1SvImJ_G0027988	Fubp1	72	34.524	MGP_129S1SvImJ_G0035232	Pcbp4	74	34.524
MGP_129S1SvImJ_G0027988	Fubp1	61	36.765	MGP_129S1SvImJ_G0031749	-	54	36.765
MGP_129S1SvImJ_G0027988	Fubp1	61	36.765	MGP_129S1SvImJ_G0031748	-	56	36.765