EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0028061 (Gene tree)
Gene ID: -
Gene Symbol: Rbm12b1
Alias: 3000004N20Rik|Rbm12b|Rbm12ba
Full Name: RNA binding motif protein 12 B1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 7687 bases
Position: chr4:8791668-8799354
Accession: 1919647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0064746	RRM_1	PF00076.22	7.2e-25	1	2
MGP_129S1SvImJ_P0064746	RRM_1	PF00076.22	7.2e-25	2	2
MGP_129S1SvImJ_P0064748	RRM_1	PF00076.22	7.2e-25	1	2
MGP_129S1SvImJ_P0064748	RRM_1	PF00076.22	7.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0064748	-	2984	-	MGP_129S1SvImJ_P0064748	641 (aa)	-	-
MGP_129S1SvImJ_T0064745	-	379	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064747	-	832	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0064746	-	2895	-	MGP_129S1SvImJ_P0064746	641 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0028061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0028061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0028061	Rbm12b1	92	97.987	MGP_129S1SvImJ_G0028062	-	71	97.987
MGP_129S1SvImJ_G0028061	Rbm12b1	64	34.314	MGP_129S1SvImJ_G0018249	Hnrnph1	78	33.333
MGP_129S1SvImJ_G0028061	Rbm12b1	64	33.333	MGP_129S1SvImJ_G0027044	Hnrnph2	78	33.333