EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0028568 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 38256 bases
Position: chr4:109992094-110030349
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0066914	Calreticulin	PF00262.18	6.4e-76	1	2
MGP_129S1SvImJ_P0066914	Calreticulin	PF00262.18	6.4e-76	2	2
MGP_129S1SvImJ_P0066915	Calreticulin	PF00262.18	7e-52	1	2
MGP_129S1SvImJ_P0066915	Calreticulin	PF00262.18	7e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0066916	-	1607	-	MGP_129S1SvImJ_P0066916	420 (aa)	-	-
MGP_129S1SvImJ_T0066917	-	532	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0066914	-	1320	XM_006502653	MGP_129S1SvImJ_P0066914	439 (aa)	XP_006502718	A2A8Z3
MGP_129S1SvImJ_T0066915	-	1583	-	MGP_129S1SvImJ_P0066915	313 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0028568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0028568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0028568	Calr4	78	36.855	MGP_129S1SvImJ_G0018247	Canx	68	37.037
MGP_129S1SvImJ_G0028568	Calr4	86	46.277	MGP_129S1SvImJ_G0033781	Calr3	86	47.262
MGP_129S1SvImJ_G0028568	Calr4	77	35.250	MGP_129S1SvImJ_G0033831	Clgn	65	34.750
MGP_129S1SvImJ_G0028568	Calr4	77	66.667	MGP_129S1SvImJ_G0033873	Calr	82	66.181