EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0028576 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 152064 bases
Position: chr4:110997102-111149165
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0066950	RRM_5	PF13893.6	2.8e-13	1	2
MGP_129S1SvImJ_P0066950	RRM_5	PF13893.6	2.8e-13	2	2
MGP_129S1SvImJ_P0066948	RRM_5	PF13893.6	3.1e-13	1	2
MGP_129S1SvImJ_P0066948	RRM_5	PF13893.6	3.1e-13	2	2
MGP_129S1SvImJ_P0066951	RRM_5	PF13893.6	3.2e-13	1	2
MGP_129S1SvImJ_P0066951	RRM_5	PF13893.6	3.2e-13	2	2
MGP_129S1SvImJ_P0066954	RRM_5	PF13893.6	3.4e-13	1	2
MGP_129S1SvImJ_P0066954	RRM_5	PF13893.6	3.4e-13	2	2
MGP_129S1SvImJ_P0066949	RRM_5	PF13893.6	3.6e-13	1	2
MGP_129S1SvImJ_P0066949	RRM_5	PF13893.6	3.6e-13	2	2
MGP_129S1SvImJ_P0066952	RRM_5	PF13893.6	3.9e-13	1	2
MGP_129S1SvImJ_P0066952	RRM_5	PF13893.6	3.9e-13	2	2
MGP_129S1SvImJ_P0066953	RRM_5	PF13893.6	4e-13	1	2
MGP_129S1SvImJ_P0066953	RRM_5	PF13893.6	4e-13	2	2
MGP_129S1SvImJ_P0066950	RRM_1	PF00076.22	2.1e-65	1	3
MGP_129S1SvImJ_P0066950	RRM_1	PF00076.22	2.1e-65	2	3
MGP_129S1SvImJ_P0066950	RRM_1	PF00076.22	2.1e-65	3	3
MGP_129S1SvImJ_P0066951	RRM_1	PF00076.22	2.4e-65	1	3
MGP_129S1SvImJ_P0066951	RRM_1	PF00076.22	2.4e-65	2	3
MGP_129S1SvImJ_P0066951	RRM_1	PF00076.22	2.4e-65	3	3
MGP_129S1SvImJ_P0066948	RRM_1	PF00076.22	2.4e-65	1	3
MGP_129S1SvImJ_P0066948	RRM_1	PF00076.22	2.4e-65	2	3
MGP_129S1SvImJ_P0066948	RRM_1	PF00076.22	2.4e-65	3	3
MGP_129S1SvImJ_P0066954	RRM_1	PF00076.22	2.5e-65	1	3
MGP_129S1SvImJ_P0066954	RRM_1	PF00076.22	2.5e-65	2	3
MGP_129S1SvImJ_P0066954	RRM_1	PF00076.22	2.5e-65	3	3
MGP_129S1SvImJ_P0066949	RRM_1	PF00076.22	2.9e-65	1	3
MGP_129S1SvImJ_P0066949	RRM_1	PF00076.22	2.9e-65	2	3
MGP_129S1SvImJ_P0066949	RRM_1	PF00076.22	2.9e-65	3	3
MGP_129S1SvImJ_P0066952	RRM_1	PF00076.22	2.9e-65	1	3
MGP_129S1SvImJ_P0066952	RRM_1	PF00076.22	2.9e-65	2	3
MGP_129S1SvImJ_P0066952	RRM_1	PF00076.22	2.9e-65	3	3
MGP_129S1SvImJ_P0066953	RRM_1	PF00076.22	3e-65	1	3
MGP_129S1SvImJ_P0066953	RRM_1	PF00076.22	3e-65	2	3
MGP_129S1SvImJ_P0066953	RRM_1	PF00076.22	3e-65	3	3
MGP_129S1SvImJ_P0066956	RRM_1	PF00076.22	1.2e-20	1	1
MGP_129S1SvImJ_P0066958	RRM_1	PF00076.22	6.8e-13	1	1
MGP_129S1SvImJ_P0066959	RRM_1	PF00076.22	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0066952	-	3799	-	MGP_129S1SvImJ_P0066952	383 (aa)	-	-
MGP_129S1SvImJ_T0066953	-	4149	-	MGP_129S1SvImJ_P0066953	385 (aa)	-	-
MGP_129S1SvImJ_T0066950	-	3761	-	MGP_129S1SvImJ_P0066950	356 (aa)	-	-
MGP_129S1SvImJ_T0066951	-	3775	-	MGP_129S1SvImJ_P0066951	366 (aa)	-	-
MGP_129S1SvImJ_T0066956	-	644	-	MGP_129S1SvImJ_P0066956	137 (aa)	-	-
MGP_129S1SvImJ_T0066957	-	464	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0066954	-	4107	-	MGP_129S1SvImJ_P0066954	371 (aa)	-	-
MGP_129S1SvImJ_T0066955	-	869	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0066958	-	663	-	MGP_129S1SvImJ_P0066958	94 (aa)	-	-
MGP_129S1SvImJ_T0066959	-	488	-	MGP_129S1SvImJ_P0066959	92 (aa)	-	-
MGP_129S1SvImJ_T0066949	-	4024	-	MGP_129S1SvImJ_P0066949	380 (aa)	-	-
MGP_129S1SvImJ_T0066948	-	3997	XM_006502793	MGP_129S1SvImJ_P0066948	366 (aa)	XP_006502856	Q61701

Gene Model

Click here to download MGP_129S1SvImJ_G0028576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0028576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0028576	Elavl4	81	38.272	MGP_129S1SvImJ_G0025332	Celf2	61	38.272
MGP_129S1SvImJ_G0028576	Elavl4	54	33.784	MGP_129S1SvImJ_G0027624	Rbm8a	62	30.693
MGP_129S1SvImJ_G0028576	Elavl4	66	42.373	MGP_129S1SvImJ_G0017492	Dazap1	64	30.275
MGP_129S1SvImJ_G0028576	Elavl4	89	33.735	MGP_129S1SvImJ_G0026834	Pabpc1l	62	33.735
MGP_129S1SvImJ_G0028576	Elavl4	88	38.272	MGP_129S1SvImJ_G0024209	Celf4	91	35.802
MGP_129S1SvImJ_G0028576	Elavl4	88	34.940	MGP_129S1SvImJ_G0024369	Pabpc2	59	34.940
MGP_129S1SvImJ_G0028576	Elavl4	88	32.468	MGP_129S1SvImJ_G0023139	Pabpc6	60	32.468
MGP_129S1SvImJ_G0028576	Elavl4	78	40.741	MGP_129S1SvImJ_G0026137	Celf1	62	40.741
MGP_129S1SvImJ_G0028576	Elavl4	57	37.037	MGP_129S1SvImJ_G0030097	Snrnp35	59	33.803
MGP_129S1SvImJ_G0028576	Elavl4	94	35.897	MGP_129S1SvImJ_G0030975	Tia1	98	32.895
MGP_129S1SvImJ_G0028576	Elavl4	99	79.893	MGP_129S1SvImJ_G0034474	Elavl3	99	80.323
MGP_129S1SvImJ_G0028576	Elavl4	70	36.458	MGP_129S1SvImJ_G0025764	Rbms1	53	32.773
MGP_129S1SvImJ_G0028576	Elavl4	99	89.315	MGP_129S1SvImJ_G0028445	Elavl2	100	89.751
MGP_129S1SvImJ_G0028576	Elavl4	85	40.741	MGP_129S1SvImJ_G0027553	Celf3	61	40.741
MGP_129S1SvImJ_G0028576	Elavl4	72	35.821	MGP_129S1SvImJ_G0030722	Tra2a	59	37.097
MGP_129S1SvImJ_G0028576	Elavl4	87	32.759	MGP_129S1SvImJ_G0028739	Pabpc4	99	32.576
MGP_129S1SvImJ_G0028576	Elavl4	70	36.458	MGP_129S1SvImJ_G0035401	Rbms3	83	37.097
MGP_129S1SvImJ_G0028576	Elavl4	78	30.088	MGP_129S1SvImJ_G0018924	Msi2	84	30.208
MGP_129S1SvImJ_G0028576	Elavl4	89	73.585	MGP_129S1SvImJ_G0033333	Elavl1	98	73.585
MGP_129S1SvImJ_G0028576	Elavl4	70	35.484	MGP_129S1SvImJ_G0027190	Pabpc4l	96	30.065
MGP_129S1SvImJ_G0028576	Elavl4	58	31.646	MGP_129S1SvImJ_G0035541	Rbm3	82	38.710
MGP_129S1SvImJ_G0028576	Elavl4	88	36.145	MGP_129S1SvImJ_G0021796	Pabpc1	58	36.145
MGP_129S1SvImJ_G0028576	Elavl4	73	33.708	MGP_129S1SvImJ_G0033806	-	66	33.708
MGP_129S1SvImJ_G0028576	Elavl4	88	35.897	MGP_129S1SvImJ_G0033083	Tial1	73	35.897
MGP_129S1SvImJ_G0028576	Elavl4	70	38.889	MGP_129S1SvImJ_G0017486	Cirbp	84	38.889
MGP_129S1SvImJ_G0028576	Elavl4	74	33.708	MGP_129S1SvImJ_G0035748	Rbmx	86	33.708
MGP_129S1SvImJ_G0028576	Elavl4	85	40.741	MGP_129S1SvImJ_G0034902	Celf6	95	35.802