EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0028618 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 31261 bases
Position: chr4:116943569-116974829
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0067125	ResIII	PF04851.15	2.2e-09	1	1
MGP_129S1SvImJ_P0067126	ResIII	PF04851.15	2.2e-09	1	1
MGP_129S1SvImJ_P0067125	DEAD	PF00270.29	9e-07	1	1
MGP_129S1SvImJ_P0067126	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0067128	-	209	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0067129	-	1515	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0067124	-	4570	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0067125	-	2780	-	MGP_129S1SvImJ_P0067125	747 (aa)	-	-
MGP_129S1SvImJ_T0067126	-	3025	-	MGP_129S1SvImJ_P0067126	747 (aa)	-	-
MGP_129S1SvImJ_T0067127	-	654	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0028618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0028618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0028618	Rad54l	88	44.604	MGP_129S1SvImJ_G0028054	Rad54b	76	44.604
MGP_129S1SvImJ_G0028618	Rad54l	66	30.785	MGP_129S1SvImJ_G0027641	Chd1l	50	30.584
MGP_129S1SvImJ_G0028618	Rad54l	66	30.112	MGP_129S1SvImJ_G0030829	Smarcad1	50	30.112
MGP_129S1SvImJ_G0028618	Rad54l	66	33.267	MGP_129S1SvImJ_G0035684	Smarca1	61	32.031