EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0028853 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: AA517475|Kiaa0099|Pumm|mKIAA0099
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 132477 bases
Position: chr4:132688009-132820485
Accession: 1931749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	1	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	2	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	3	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	4	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	5	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	6	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	7	8
MGP_129S1SvImJ_P0068161	PUF	PF00806.19	3.2e-70	8	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	1	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	2	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	3	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	4	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	5	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	6	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	7	8
MGP_129S1SvImJ_P0068165	PUF	PF00806.19	2.4e-69	8	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	1	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	2	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	3	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	4	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	5	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	6	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	7	8
MGP_129S1SvImJ_P0068162	PUF	PF00806.19	2.8e-69	8	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	1	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	2	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	3	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	4	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	5	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	6	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	7	8
MGP_129S1SvImJ_P0068166	PUF	PF00806.19	5.9e-69	8	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	1	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	2	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	3	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	4	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	5	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	6	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	7	8
MGP_129S1SvImJ_P0068160	PUF	PF00806.19	6e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0068165	-	4017	-	MGP_129S1SvImJ_P0068165	1186 (aa)	-	-
MGP_129S1SvImJ_T0068164	-	693	-	MGP_129S1SvImJ_P0068164	218 (aa)	-	-
MGP_129S1SvImJ_T0068166	-	3991	-	MGP_129S1SvImJ_P0068166	1188 (aa)	-	-
MGP_129S1SvImJ_T0068161	-	4616	-	MGP_129S1SvImJ_P0068161	944 (aa)	-	-
MGP_129S1SvImJ_T0068160	-	5391	XM_006539291	MGP_129S1SvImJ_P0068160	1189 (aa)	XP_006539354	Q80U78
MGP_129S1SvImJ_T0068163	-	1273	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0068162	-	5060	-	MGP_129S1SvImJ_P0068162	1092 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0028853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0028853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0028853	Pum1	86	87.294	MGP_129S1SvImJ_G0019587	Pum2	100	88.835