EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_129S1SvImJ_G0028868 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Minus strand
Length
20677 bases
Position
chr4:134451603-134472279
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0068244RRM_1PF00076.224.3e-2712
MGP_129S1SvImJ_P0068244RRM_1PF00076.224.3e-2722
MGP_129S1SvImJ_P0068243RRM_1PF00076.221.7e-1711
MGP_129S1SvImJ_P0068248RRM_1PF00076.221.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0068253-371-MGP_129S1SvImJ_P006825370 (aa)--
MGP_129S1SvImJ_T0068252-679--- (aa)--
MGP_129S1SvImJ_T0068251-663-MGP_129S1SvImJ_P006825149 (aa)--
MGP_129S1SvImJ_T0068243-961XM_011250332MGP_129S1SvImJ_P0068243247 (aa)XP_011248634Q80VC6
MGP_129S1SvImJ_T0068244-1130-MGP_129S1SvImJ_P0068244287 (aa)--
MGP_129S1SvImJ_T0068245-1791--- (aa)--
MGP_129S1SvImJ_T0068246-650--- (aa)--
MGP_129S1SvImJ_T0068247-1017-MGP_129S1SvImJ_P006824786 (aa)--
MGP_129S1SvImJ_T0068248-474-MGP_129S1SvImJ_P0068248146 (aa)--
MGP_129S1SvImJ_T0068249-600-MGP_129S1SvImJ_P006824947 (aa)--
MGP_129S1SvImJ_T0068254-621--- (aa)--
MGP_129S1SvImJ_T0068250-553--- (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0028868's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0028868's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_129S1SvImJ_G0028868Trnau1ap9830.952MGP_129S1SvImJ_G0028445Elavl26630.952
MGP_129S1SvImJ_G0028868Trnau1ap8834.211MGP_129S1SvImJ_G0027190Pabpc4l8931.875
MGP_129S1SvImJ_G0028868Trnau1ap7930.198MGP_129S1SvImJ_G0030975Tia16031.285
MGP_129S1SvImJ_G0028868Trnau1ap6032.386MGP_129S1SvImJ_G0033083Tial17333.019

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