EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0029236 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf3l
Alias: 2410006F12Rik|AU044035|Ints11
Full Name: cleavage and polyadenylation specific factor 3-like
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 21885 bases
Position: chr4:160240006-160261890
Accession: 1919207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0069871	Beta-Casp	PF10996.8	1e-25	1	1
MGP_129S1SvImJ_P0069870	Beta-Casp	PF10996.8	1.1e-25	1	1
MGP_129S1SvImJ_P0069870	Lactamase_B	PF00753.27	1.8e-10	1	1
MGP_129S1SvImJ_P0069871	Lactamase_B	PF00753.27	9e-10	1	1
MGP_129S1SvImJ_P0069871	RMMBL	PF07521.12	1.1e-16	1	1
MGP_129S1SvImJ_P0069870	RMMBL	PF07521.12	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0069869	-	2199	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0069870	-	2368	-	MGP_129S1SvImJ_P0069870	600 (aa)	-	-
MGP_129S1SvImJ_T0069871	-	1884	-	MGP_129S1SvImJ_P0069871	578 (aa)	-	-
MGP_129S1SvImJ_T0069872	-	349	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0069873	-	880	-	MGP_129S1SvImJ_P0069873	94 (aa)	-	-
MGP_129S1SvImJ_T0069874	-	475	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0069876	-	517	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0029236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0029236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0029236	Cpsf3l	82	37.945	MGP_129S1SvImJ_G0019623	Cpsf3	71	37.945