EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0029576 (Gene tree)
Gene ID: -
Gene Symbol: Rpl9
Alias: -
Full Name: ribosomal protein L9
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 3085 bases
Position: chr5:65022945-65026029
Accession: 1298373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0071810	Ribosomal_L6	PF00347.23	1.1e-32	1	2
MGP_129S1SvImJ_P0071810	Ribosomal_L6	PF00347.23	1.1e-32	2	2
MGP_129S1SvImJ_P0071812	Ribosomal_L6	PF00347.23	7.4e-27	1	2
MGP_129S1SvImJ_P0071812	Ribosomal_L6	PF00347.23	7.4e-27	2	2
MGP_129S1SvImJ_P0071814	Ribosomal_L6	PF00347.23	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0071817	-	1586	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0071816	-	456	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0071815	-	2651	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0071814	-	2690	-	MGP_129S1SvImJ_P0071814	108 (aa)	-	-
MGP_129S1SvImJ_T0071813	-	387	-	MGP_129S1SvImJ_P0071813	65 (aa)	-	-
MGP_129S1SvImJ_T0071812	-	1193	-	MGP_129S1SvImJ_P0071812	166 (aa)	-	-
MGP_129S1SvImJ_T0071811	-	431	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0071810	-	742	-	MGP_129S1SvImJ_P0071810	192 (aa)	-	P51410
MGP_129S1SvImJ_T0071818	-	1729	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0029576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0029576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0029576	Rpl9	97	92.063	MGP_129S1SvImJ_G0018855	Rpl9-ps1	100	84.375