EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_129S1SvImJ_G0029587 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Minus strand
Length
168362 bases
Position
chr5:65720066-65888427
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0071891RRM_1PF00076.223.6e-3713
MGP_129S1SvImJ_P0071891RRM_1PF00076.223.6e-3723
MGP_129S1SvImJ_P0071891RRM_1PF00076.223.6e-3733
MGP_129S1SvImJ_P0071887RRM_1PF00076.225.7e-3713
MGP_129S1SvImJ_P0071887RRM_1PF00076.225.7e-3723
MGP_129S1SvImJ_P0071887RRM_1PF00076.225.7e-3733
MGP_129S1SvImJ_P0071888RRM_1PF00076.225.7e-3713
MGP_129S1SvImJ_P0071888RRM_1PF00076.225.7e-3723
MGP_129S1SvImJ_P0071888RRM_1PF00076.225.7e-3733
MGP_129S1SvImJ_P0071889RRM_1PF00076.225.7e-3713
MGP_129S1SvImJ_P0071889RRM_1PF00076.225.7e-3723
MGP_129S1SvImJ_P0071889RRM_1PF00076.225.7e-3733
MGP_129S1SvImJ_P0071890RRM_1PF00076.225.7e-3713
MGP_129S1SvImJ_P0071890RRM_1PF00076.225.7e-3723
MGP_129S1SvImJ_P0071890RRM_1PF00076.225.7e-3733
MGP_129S1SvImJ_P0071892RRM_1PF00076.225.7e-3713
MGP_129S1SvImJ_P0071892RRM_1PF00076.225.7e-3723
MGP_129S1SvImJ_P0071892RRM_1PF00076.225.7e-3733
MGP_129S1SvImJ_P0071893RRM_1PF00076.225.7e-3713
MGP_129S1SvImJ_P0071893RRM_1PF00076.225.7e-3723
MGP_129S1SvImJ_P0071893RRM_1PF00076.225.7e-3733
MGP_129S1SvImJ_P0071895RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0071894-2398--- (aa)--
MGP_129S1SvImJ_T0071900-464--- (aa)--
MGP_129S1SvImJ_T0071888-5205-MGP_129S1SvImJ_P0071888590 (aa)--
MGP_129S1SvImJ_T0071889-5512-MGP_129S1SvImJ_P0071889590 (aa)--
MGP_129S1SvImJ_T0071899-452--- (aa)--
MGP_129S1SvImJ_T0071898-530-MGP_129S1SvImJ_P00718986 (aa)--
MGP_129S1SvImJ_T0071897-332-MGP_129S1SvImJ_P007189713 (aa)--
MGP_129S1SvImJ_T0071896-504--- (aa)--
MGP_129S1SvImJ_T0071895-703-MGP_129S1SvImJ_P0071895158 (aa)--
MGP_129S1SvImJ_T0071887-4697XM_006503956MGP_129S1SvImJ_P0071887590 (aa)XP_006504019Q91WT8
MGP_129S1SvImJ_T0071893-2186-MGP_129S1SvImJ_P0071893590 (aa)--
MGP_129S1SvImJ_T0071892-3031-MGP_129S1SvImJ_P0071892590 (aa)--
MGP_129S1SvImJ_T0071891-2824-MGP_129S1SvImJ_P0071891521 (aa)--
MGP_129S1SvImJ_T0071890-4889-MGP_129S1SvImJ_P0071890590 (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0029587's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0029587's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_129S1SvImJ_G0029587Rbm478859.859MGP_129S1SvImJ_G0028965Hnrnpr8545.815
MGP_129S1SvImJ_G0029587Rbm479473.649MGP_129S1SvImJ_G0027329Rbm466672.468
MGP_129S1SvImJ_G0029587Rbm478967.376MGP_129S1SvImJ_G0025037A1cf7656.632
MGP_129S1SvImJ_G0029587Rbm478150.781MGP_129S1SvImJ_G0024290Dnd15841.748
MGP_129S1SvImJ_G0029587Rbm478858.451MGP_129S1SvImJ_G0035109Syncrip7557.522

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