EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0029758 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 84675 bases
Position: chr5:94312794-94397468
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0072699	MMR_HSR1	PF01926.23	6.8e-07	1	1
MGP_129S1SvImJ_P0072697	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_129S1SvImJ_P0072695	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_129S1SvImJ_P0072700	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_129S1SvImJ_P0072702	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0072702	-	1380	-	MGP_129S1SvImJ_P0072702	432 (aa)	-	-
MGP_129S1SvImJ_T0072703	-	1119	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0072700	-	2429	-	MGP_129S1SvImJ_P0072700	431 (aa)	-	-
MGP_129S1SvImJ_T0072701	-	434	-	MGP_129S1SvImJ_P0072701	97 (aa)	-	-
MGP_129S1SvImJ_T0072698	-	1066	-	MGP_129S1SvImJ_P0072698	204 (aa)	-	-
MGP_129S1SvImJ_T0072699	-	1793	-	MGP_129S1SvImJ_P0072699	425 (aa)	-	-
MGP_129S1SvImJ_T0072695	-	5031	XM_006535104	MGP_129S1SvImJ_P0072695	429 (aa)	XP_006535161	Q8C1B7
MGP_129S1SvImJ_T0072696	-	640	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0072697	-	3467	-	MGP_129S1SvImJ_P0072697	425 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0029758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0029758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0029758	Sept11	69	43.234	MGP_129S1SvImJ_G0016343	Sept2	100	42.202
MGP_129S1SvImJ_G0029758	Sept11	100	82.201	MGP_129S1SvImJ_G0035628	Sept6	100	82.028
MGP_129S1SvImJ_G0029758	Sept11	98	72.771	MGP_129S1SvImJ_G0017253	Sept10	85	76.712
MGP_129S1SvImJ_G0029758	Sept11	60	38.077	MGP_129S1SvImJ_G0022479	Sept12	82	37.931
MGP_129S1SvImJ_G0029758	Sept11	69	44.000	MGP_129S1SvImJ_G0022140	Sept3	89	44.000
MGP_129S1SvImJ_G0029758	Sept11	76	41.493	MGP_129S1SvImJ_G0022616	Sept5	90	40.828
MGP_129S1SvImJ_G0029758	Sept11	67	43.878	MGP_129S1SvImJ_G0018906	Sept4	85	45.000
MGP_129S1SvImJ_G0029758	Sept11	76	40.762	MGP_129S1SvImJ_G0033026	Sept1	100	40.816
MGP_129S1SvImJ_G0029758	Sept11	99	39.954	MGP_129S1SvImJ_G0034497	Sept7	80	41.737
MGP_129S1SvImJ_G0029758	Sept11	67	42.953	MGP_129S1SvImJ_G0019446	Sept9	81	46.970
MGP_129S1SvImJ_G0029758	Sept11	99	79.157	MGP_129S1SvImJ_G0018298	Sept8	88	81.915