EuRBPDB

Description

Ensembl ID: MGP_129S1SvImJ_G0029782 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 6080 bases
Position: chr5:101484256-101490335
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0072795	RRM_1	PF00076.22	2.3e-33	1	2
MGP_129S1SvImJ_P0072795	RRM_1	PF00076.22	2.3e-33	2	2
MGP_129S1SvImJ_P0072794	RRM_1	PF00076.22	5.3e-33	1	2
MGP_129S1SvImJ_P0072794	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0072799	-	846	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0072798	-	1477	-	MGP_129S1SvImJ_P0072798	100 (aa)	-	-
MGP_129S1SvImJ_T0072793	-	1842	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0072795	-	2374	-	MGP_129S1SvImJ_P0072795	322 (aa)	-	-
MGP_129S1SvImJ_T0072794	-	2752	-	MGP_129S1SvImJ_P0072794	420 (aa)	-	-
MGP_129S1SvImJ_T0072797	-	884	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0072796	-	2149	-	MGP_129S1SvImJ_P0072796	420 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0029782	Hnrnpdl	69	36.036	MGP_129S1SvImJ_G0017492	Dazap1	99	39.881
MGP_129S1SvImJ_G0029782	Hnrnpdl	87	65.074	MGP_129S1SvImJ_G0029780	Hnrnpd	80	72.674
MGP_129S1SvImJ_G0029782	Hnrnpdl	58	38.542	MGP_129S1SvImJ_G0030734	Hnrnpa2b1	58	38.824
MGP_129S1SvImJ_G0029782	Hnrnpdl	51	34.706	MGP_129S1SvImJ_G0020627	Hnrnpa0	56	34.706
MGP_129S1SvImJ_G0029782	Hnrnpdl	78	41.634	MGP_129S1SvImJ_G0018924	Msi2	100	54.867
MGP_129S1SvImJ_G0029782	Hnrnpdl	55	38.889	MGP_129S1SvImJ_G0033806	-	54	44.000
MGP_129S1SvImJ_G0029782	Hnrnpdl	89	57.292	MGP_129S1SvImJ_G0018269	Hnrnpab	82	58.419
MGP_129S1SvImJ_G0029782	Hnrnpdl	64	30.000	MGP_129S1SvImJ_G0029129	Tardbp	77	31.447
MGP_129S1SvImJ_G0029782	Hnrnpdl	54	36.709	MGP_129S1SvImJ_G0017486	Cirbp	73	36.709
MGP_129S1SvImJ_G0029782	Hnrnpdl	75	39.676	MGP_129S1SvImJ_G0029969	Msi1	58	48.052