EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0029844 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 9371 bases
Position: chr5:109764526-109773896
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0073074	zf-C2H2	PF00096.26	5e-28	1	6
MGP_129S1SvImJ_P0073074	zf-C2H2	PF00096.26	5e-28	2	6
MGP_129S1SvImJ_P0073074	zf-C2H2	PF00096.26	5e-28	3	6
MGP_129S1SvImJ_P0073074	zf-C2H2	PF00096.26	5e-28	4	6
MGP_129S1SvImJ_P0073074	zf-C2H2	PF00096.26	5e-28	5	6
MGP_129S1SvImJ_P0073074	zf-C2H2	PF00096.26	5e-28	6	6
MGP_129S1SvImJ_P0073075	zf-C2H2	PF00096.26	5e-28	1	6
MGP_129S1SvImJ_P0073075	zf-C2H2	PF00096.26	5e-28	2	6
MGP_129S1SvImJ_P0073075	zf-C2H2	PF00096.26	5e-28	3	6
MGP_129S1SvImJ_P0073075	zf-C2H2	PF00096.26	5e-28	4	6
MGP_129S1SvImJ_P0073075	zf-C2H2	PF00096.26	5e-28	5	6
MGP_129S1SvImJ_P0073075	zf-C2H2	PF00096.26	5e-28	6	6
MGP_129S1SvImJ_P0073076	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_129S1SvImJ_P0073076	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_129S1SvImJ_P0073076	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_129S1SvImJ_P0073076	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_129S1SvImJ_P0073076	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_129S1SvImJ_P0073076	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_129S1SvImJ_P0073077	zf-C2H2	PF00096.26	9.4e-25	1	4
MGP_129S1SvImJ_P0073077	zf-C2H2	PF00096.26	9.4e-25	2	4
MGP_129S1SvImJ_P0073077	zf-C2H2	PF00096.26	9.4e-25	3	4
MGP_129S1SvImJ_P0073077	zf-C2H2	PF00096.26	9.4e-25	4	4
MGP_129S1SvImJ_P0073077	zf-met	PF12874.7	2.2e-08	1	1
MGP_129S1SvImJ_P0073074	zf-met	PF12874.7	2.5e-07	1	1
MGP_129S1SvImJ_P0073075	zf-met	PF12874.7	2.5e-07	1	1
MGP_129S1SvImJ_P0073076	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0073078	-	689	-	MGP_129S1SvImJ_P0073078	186 (aa)	-	-
MGP_129S1SvImJ_T0073077	-	1482	-	MGP_129S1SvImJ_P0073077	135 (aa)	-	-
MGP_129S1SvImJ_T0073076	-	2639	-	MGP_129S1SvImJ_P0073076	489 (aa)	-	-
MGP_129S1SvImJ_T0073075	-	2860	-	MGP_129S1SvImJ_P0073075	423 (aa)	-	-
MGP_129S1SvImJ_T0073074	-	2648	XM_006534791	MGP_129S1SvImJ_P0073074	423 (aa)	XP_006534854	A0A0R4J292

Gene Model

Click here to download MGP_129S1SvImJ_G0029844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0029844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0029844	Gfi1	100	46.457	MGP_129S1SvImJ_G0031823	Zfp94	65	44.970
MGP_129S1SvImJ_G0029844	Gfi1	100	50.427	MGP_129S1SvImJ_G0031820	Zfp108	67	45.000
MGP_129S1SvImJ_G0029844	Gfi1	100	48.276	MGP_129S1SvImJ_G0018349	Zfp672	90	48.276
MGP_129S1SvImJ_G0029844	Gfi1	100	46.457	MGP_129S1SvImJ_G0034143	Zfp1	60	43.478
MGP_129S1SvImJ_G0029844	Gfi1	99	48.507	MGP_129S1SvImJ_G0026463	Zfp661	62	48.507
MGP_129S1SvImJ_G0029844	Gfi1	100	43.590	MGP_129S1SvImJ_G0031178	Zfp637	71	43.590
MGP_129S1SvImJ_G0029844	Gfi1	100	49.254	MGP_129S1SvImJ_G0022013	Zfp251	67	49.254
MGP_129S1SvImJ_G0029844	Gfi1	100	46.094	MGP_129S1SvImJ_G0033765	Zfp882	85	46.094
MGP_129S1SvImJ_G0029844	Gfi1	100	45.794	MGP_129S1SvImJ_G0018255	Zfp454	68	42.262
MGP_129S1SvImJ_G0029844	Gfi1	100	44.030	MGP_129S1SvImJ_G0034481	Zfp872	80	41.477
MGP_129S1SvImJ_G0029844	Gfi1	100	42.857	MGP_129S1SvImJ_G0023258	Zscan10	85	42.771
MGP_129S1SvImJ_G0029844	Gfi1	100	47.863	MGP_129S1SvImJ_G0026892	Zfp334	65	47.651
MGP_129S1SvImJ_G0029844	Gfi1	100	48.031	MGP_129S1SvImJ_G0031816	Zfp235	61	46.377
MGP_129S1SvImJ_G0029844	Gfi1	100	48.507	MGP_129S1SvImJ_G0031990	Zfp420	98	48.031
MGP_129S1SvImJ_G0029844	Gfi1	100	49.219	MGP_129S1SvImJ_G0029507	Zbtb49	62	51.786
MGP_129S1SvImJ_G0029844	Gfi1	100	44.882	MGP_129S1SvImJ_G0032117	Zfp715	63	43.210
MGP_129S1SvImJ_G0029844	Gfi1	100	45.312	MGP_129S1SvImJ_G0023227	Zfp677	82	43.195
MGP_129S1SvImJ_G0029844	Gfi1	100	46.269	MGP_129S1SvImJ_G0023229	Zfp51	77	44.828
MGP_129S1SvImJ_G0029844	Gfi1	99	47.287	MGP_129S1SvImJ_G0030700	Repin1	90	47.287
MGP_129S1SvImJ_G0029844	Gfi1	100	45.238	MGP_129S1SvImJ_G0018399	Zfp867	79	43.023
MGP_129S1SvImJ_G0029844	Gfi1	100	39.535	MGP_129S1SvImJ_G0033983	Zfp319	93	40.116
MGP_129S1SvImJ_G0029844	Gfi1	99	45.714	MGP_129S1SvImJ_G0031853	Zfp574	61	43.925
MGP_129S1SvImJ_G0029844	Gfi1	100	46.739	MGP_129S1SvImJ_G0024602	Zfp236	54	46.739
MGP_129S1SvImJ_G0029844	Gfi1	100	47.788	MGP_129S1SvImJ_G0020698	Rslcan18	71	47.788
MGP_129S1SvImJ_G0029844	Gfi1	100	44.444	MGP_129S1SvImJ_G0020699	Zfp759	89	44.444
MGP_129S1SvImJ_G0029844	Gfi1	100	47.706	MGP_129S1SvImJ_G0020717	-	92	47.706
MGP_129S1SvImJ_G0029844	Gfi1	100	48.031	MGP_129S1SvImJ_G0020716	Zfp748	92	48.447
MGP_129S1SvImJ_G0029844	Gfi1	100	50.820	MGP_129S1SvImJ_G0020719	Zfp65	90	50.820
MGP_129S1SvImJ_G0029844	Gfi1	99	47.368	MGP_129S1SvImJ_G0031576	Zfp865	63	47.368
MGP_129S1SvImJ_G0029844	Gfi1	99	44.444	MGP_129S1SvImJ_G0031579	Zfp784	71	44.444
MGP_129S1SvImJ_G0029844	Gfi1	100	45.522	MGP_129S1SvImJ_G0033764	Zfp709	82	43.976
MGP_129S1SvImJ_G0029844	Gfi1	99	45.038	MGP_129S1SvImJ_G0033035	E430018J23Rik	60	42.197
MGP_129S1SvImJ_G0029844	Gfi1	100	54.321	MGP_129S1SvImJ_G0033032	Zfp768	51	45.517
MGP_129S1SvImJ_G0029844	Gfi1	99	45.133	MGP_129S1SvImJ_G0030834	Prdm5	74	43.846
MGP_129S1SvImJ_G0029844	Gfi1	100	47.368	MGP_129S1SvImJ_G0026930	Zfp64	70	38.298