EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_129S1SvImJ_G0030037 (Gene tree)
Gene ID
-
Gene Symbol
Atxn2
Alias
9630045M23Rik|ATX2|AW544490|Sca2
Full Name
ataxin 2
Gene Type
protein_coding
Species
Mus_musculus_129s1svimj
Status
putative
Strand
Plus strand
Length
119008 bases
Position
chr5:125269458-125388465
Accession
1277223
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_129S1SvImJ_P0074030PAM2PF07145.158.9e-0711
MGP_129S1SvImJ_P0074027PAM2PF07145.151.7e-0611
MGP_129S1SvImJ_P0074033PAM2PF07145.151.9e-0611
MGP_129S1SvImJ_P0074030LsmADPF06741.138.1e-1611
MGP_129S1SvImJ_P0074027LsmADPF06741.131.3e-1511
MGP_129S1SvImJ_P0074031LsmADPF06741.133.7e-0711
MGP_129S1SvImJ_P0074027SM-ATXPF14438.67.4e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_129S1SvImJ_T0074045-411-MGP_129S1SvImJ_P007404563 (aa)--
MGP_129S1SvImJ_T0074044-388-MGP_129S1SvImJ_P007404496 (aa)--
MGP_129S1SvImJ_T0074043-578--- (aa)--
MGP_129S1SvImJ_T0074042-482--- (aa)--
MGP_129S1SvImJ_T0074041-397-MGP_129S1SvImJ_P007404165 (aa)--
MGP_129S1SvImJ_T0074040-1467--- (aa)--
MGP_129S1SvImJ_T0074030-3293-MGP_129S1SvImJ_P0074030929 (aa)--
MGP_129S1SvImJ_T0074032-3134--- (aa)--
MGP_129S1SvImJ_T0074033-2343-MGP_129S1SvImJ_P0074033662 (aa)--
MGP_129S1SvImJ_T0074027-4310XM_006530228MGP_129S1SvImJ_P00740271241 (aa)XP_006530291A0A0G2JF15
MGP_129S1SvImJ_T0074031-990-MGP_129S1SvImJ_P0074031329 (aa)--
MGP_129S1SvImJ_T0074036-240--- (aa)--
MGP_129S1SvImJ_T0074037-754--- (aa)--
MGP_129S1SvImJ_T0074034-1003--- (aa)--
MGP_129S1SvImJ_T0074035-755--- (aa)--
MGP_129S1SvImJ_T0074038-6946--- (aa)--
MGP_129S1SvImJ_T0074039-891-MGP_129S1SvImJ_P0074039234 (aa)--
MGP_129S1SvImJ_T0074029-441--- (aa)--
MGP_129S1SvImJ_T0074028-461--- (aa)--
Gene Model
Click here to download MGP_129S1SvImJ_G0030037's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030037's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_129S1SvImJ_G0030037Atxn29540.125MGP_129S1SvImJ_G0032984Atxn2l8055.682

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us