EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030094 (Gene tree)
Gene ID: -
Gene Symbol: Sbno1
Alias: 9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno
Full Name: strawberry notch homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 64805 bases
Position: chr5:128177271-128242075
Accession: 2384298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0074430	ResIII	PF04851.15	2e-07	1	1
MGP_129S1SvImJ_P0074426	ResIII	PF04851.15	2.2e-07	1	1
MGP_129S1SvImJ_P0074428	ResIII	PF04851.15	2.6e-07	1	1
MGP_129S1SvImJ_P0074419	ResIII	PF04851.15	3.6e-07	1	1
MGP_129S1SvImJ_P0074420	ResIII	PF04851.15	3.6e-07	1	1
MGP_129S1SvImJ_P0074421	ResIII	PF04851.15	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0074429	-	1199	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074428	-	2511	-	MGP_129S1SvImJ_P0074428	785 (aa)	-	-
MGP_129S1SvImJ_T0074419	-	10069	XM_006530317	MGP_129S1SvImJ_P0074419	1391 (aa)	XP_006530380	A0A0G2JDL6
MGP_129S1SvImJ_T0074421	-	4170	-	MGP_129S1SvImJ_P0074421	1390 (aa)	-	-
MGP_129S1SvImJ_T0074420	-	10159	-	MGP_129S1SvImJ_P0074420	1391 (aa)	-	-
MGP_129S1SvImJ_T0074423	-	972	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074422	-	1061	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074425	-	1512	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074424	-	652	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074427	-	599	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074426	-	2413	-	MGP_129S1SvImJ_P0074426	755 (aa)	-	-
MGP_129S1SvImJ_T0074436	-	2022	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074434	-	599	-	MGP_129S1SvImJ_P0074434	133 (aa)	-	-
MGP_129S1SvImJ_T0074435	-	353	-	MGP_129S1SvImJ_P0074435	92 (aa)	-	-
MGP_129S1SvImJ_T0074432	-	1224	-	MGP_129S1SvImJ_P0074432	241 (aa)	-	-
MGP_129S1SvImJ_T0074433	-	772	-	MGP_129S1SvImJ_P0074433	211 (aa)	-	-
MGP_129S1SvImJ_T0074430	-	2100	-	MGP_129S1SvImJ_P0074430	663 (aa)	-	-
MGP_129S1SvImJ_T0074431	-	5295	-	MGP_129S1SvImJ_P0074431	263 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0030094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030094	Sbno1	95	67.982	MGP_129S1SvImJ_G0017481	Sbno2	70	67.800