EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030100 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 18858 bases
Position: chr5:128383036-128401893
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0074463	ResIII	PF04851.15	5.6e-07	1	1
MGP_129S1SvImJ_P0074463	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0074465	-	477	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074464	-	445	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074467	-	824	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074466	-	1429	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0074463	-	2792	-	MGP_129S1SvImJ_P0074463	618 (aa)	-	-
MGP_129S1SvImJ_T0074462	-	3516	-	MGP_129S1SvImJ_P0074462	135 (aa)	-	Q6ZPL9

Gene Model

Click here to download MGP_129S1SvImJ_G0030100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030100	Ddx55	56	33.056	MGP_129S1SvImJ_G0033699	Ddx49	92	33.238
MGP_129S1SvImJ_G0030100	Ddx55	57	30.137	MGP_129S1SvImJ_G0019313	Ddx5	66	30.137
MGP_129S1SvImJ_G0030100	Ddx55	72	31.528	MGP_129S1SvImJ_G0025533	Ddx31	74	31.528
MGP_129S1SvImJ_G0030100	Ddx55	57	35.200	MGP_129S1SvImJ_G0035571	Ddx3x	54	35.106
MGP_129S1SvImJ_G0030100	Ddx55	57	35.733	MGP_129S1SvImJ_G0016921	D1Pas1	54	35.733
MGP_129S1SvImJ_G0030100	Ddx55	58	30.137	MGP_129S1SvImJ_G0022678	Eif4a2	93	30.362
MGP_129S1SvImJ_G0030100	Ddx55	73	38.631	MGP_129S1SvImJ_G0034807	Ddx10	50	38.631
MGP_129S1SvImJ_G0030100	Ddx55	58	30.769	MGP_129S1SvImJ_G0018546	Eif4a1	90	30.769
MGP_129S1SvImJ_G0030100	Ddx55	58	32.044	MGP_129S1SvImJ_G0035068	Ddx43	53	32.044
MGP_129S1SvImJ_G0030100	Ddx55	61	30.750	MGP_129S1SvImJ_G0018863	Ddx52	62	30.750
MGP_129S1SvImJ_G0030100	Ddx55	61	31.234	MGP_129S1SvImJ_G0034714	Ddx6	74	31.234
MGP_129S1SvImJ_G0030100	Ddx55	56	31.429	MGP_129S1SvImJ_G0016541	Ddx59	54	31.429
MGP_129S1SvImJ_G0030100	Ddx55	57	35.977	MGP_129S1SvImJ_G0031412	Ddx47	81	35.977
MGP_129S1SvImJ_G0030100	Ddx55	57	35.635	MGP_129S1SvImJ_G0020602	Ddx41	55	35.440
MGP_129S1SvImJ_G0030100	Ddx55	58	30.886	MGP_129S1SvImJ_G0034074	Ddx28	69	30.886
MGP_129S1SvImJ_G0030100	Ddx55	57	32.687	MGP_129S1SvImJ_G0022077	Ddx17	53	32.687
MGP_129S1SvImJ_G0030100	Ddx55	77	36.326	MGP_129S1SvImJ_G0016412	Ddx18	68	36.326