EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030213 (Gene tree)
Gene ID: -
Gene Symbol: Plod3
Alias: AI414586|LH3|lysyl hydroxylase 3
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 9638 bases
Position: chr5:141692121-141701758
Accession: 1347008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0075104	2OG-FeII_Oxy	PF03171.20	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0075109	-	600	-	MGP_129S1SvImJ_P0075109	199 (aa)	-	-
MGP_129S1SvImJ_T0075108	-	842	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0075105	-	2362	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0075104	-	3280	XM_006504423	MGP_129S1SvImJ_P0075104	741 (aa)	XP_006504486	Q9R0E1
MGP_129S1SvImJ_T0075107	-	932	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0075106	-	2843	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0030213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030213	Plod3	95	60.369	MGP_129S1SvImJ_G0029110	Plod1	97	60.369
MGP_129S1SvImJ_G0030213	Plod3	100	57.895	MGP_129S1SvImJ_G0035130	Plod2	95	59.829