EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030734 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 8963 bases
Position: chr6:50649570-50658532
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0077518	RRM_1	PF00076.22	3.3e-32	1	2
MGP_129S1SvImJ_P0077518	RRM_1	PF00076.22	3.3e-32	2	2
MGP_129S1SvImJ_P0077524	RRM_1	PF00076.22	3.3e-32	1	2
MGP_129S1SvImJ_P0077524	RRM_1	PF00076.22	3.3e-32	2	2
MGP_129S1SvImJ_P0077521	RRM_1	PF00076.22	5e-32	1	2
MGP_129S1SvImJ_P0077521	RRM_1	PF00076.22	5e-32	2	2
MGP_129S1SvImJ_P0077525	RRM_1	PF00076.22	5e-32	1	2
MGP_129S1SvImJ_P0077525	RRM_1	PF00076.22	5e-32	2	2
MGP_129S1SvImJ_P0077523	RRM_1	PF00076.22	5.5e-32	1	2
MGP_129S1SvImJ_P0077523	RRM_1	PF00076.22	5.5e-32	2	2
MGP_129S1SvImJ_P0077527	RRM_1	PF00076.22	1.9e-15	1	1
MGP_129S1SvImJ_P0077527	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_129S1SvImJ_P0077518	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_129S1SvImJ_P0077524	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0077521	-	1662	-	MGP_129S1SvImJ_P0077521	341 (aa)	-	-
MGP_129S1SvImJ_T0077520	-	1542	-	MGP_129S1SvImJ_P0077520	301 (aa)	-	-
MGP_129S1SvImJ_T0077523	-	1728	-	MGP_129S1SvImJ_P0077523	353 (aa)	-	-
MGP_129S1SvImJ_T0077522	-	1554	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0077525	-	1638	-	MGP_129S1SvImJ_P0077525	341 (aa)	-	-
MGP_129S1SvImJ_T0077524	-	1518	-	MGP_129S1SvImJ_P0077524	301 (aa)	-	-
MGP_129S1SvImJ_T0077527	-	466	-	MGP_129S1SvImJ_P0077527	154 (aa)	-	-
MGP_129S1SvImJ_T0077526	-	766	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0077529	-	596	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0077528	-	706	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0077518	-	1647	XM_006506373	MGP_129S1SvImJ_P0077518	301 (aa)	XP_006506436	O88569
MGP_129S1SvImJ_T0077519	-	1703	-	MGP_129S1SvImJ_P0077519	353 (aa)	-	-
MGP_129S1SvImJ_T0077530	-	3645	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0030734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	54	40.260	MGP_129S1SvImJ_G0033806	-	73	36.842
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	58	38.824	MGP_129S1SvImJ_G0029782	Hnrnpdl	58	38.542
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	72	41.148	MGP_129S1SvImJ_G0029780	Hnrnpd	83	41.053
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	82	74.286	MGP_129S1SvImJ_G0022435	Hnrnpa1	88	55.319
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	60	41.026	MGP_129S1SvImJ_G0017492	Dazap1	99	40.237
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	91	41.379	MGP_129S1SvImJ_G0029969	Msi1	61	43.750
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	56	38.554	MGP_129S1SvImJ_G0035748	Rbmx	90	40.299
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	56	48.193	MGP_129S1SvImJ_G0018924	Msi2	100	44.348
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	69	31.776	MGP_129S1SvImJ_G0016035	Boll	64	33.333
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	55	82.456	MGP_129S1SvImJ_G0025856	Hnrnpa3	71	57.358
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	59	55.307	MGP_129S1SvImJ_G0020627	Hnrnpa0	91	49.640
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	66	32.143	MGP_129S1SvImJ_G0034902	Celf6	79	31.250
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	50	44.737	MGP_129S1SvImJ_G0017486	Cirbp	70	44.737
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	66	30.348	MGP_129S1SvImJ_G0029129	Tardbp	94	30.282
MGP_129S1SvImJ_G0030734	Hnrnpa2b1	61	38.068	MGP_129S1SvImJ_G0018269	Hnrnpab	64	37.368