EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030866 (Gene tree)
Gene ID: -
Gene Symbol: Polr1a
Alias: 194kDa|3010014K16Rik|RPA194|Rpa1|Rpo1-4|mRPA1
Full Name: polymerase (RNA) I polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 74286 bases
Position: chr6:72417552-72491837
Accession: 1096397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0078020	RNA_pol_Rpb1_5	PF04998.17	6.5e-103	1	1
MGP_129S1SvImJ_P0078020	RNA_pol_Rpb1_4	PF05000.17	1.5e-25	1	1
MGP_129S1SvImJ_P0078020	RNA_pol_Rpb1_2	PF00623.20	3.5e-70	1	1
MGP_129S1SvImJ_P0078020	RNA_pol_Rpb1_3	PF04983.18	8.9e-37	1	1
MGP_129S1SvImJ_P0078020	RNA_pol_Rpb1_1	PF04997.12	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0078028	-	4572	-	MGP_129S1SvImJ_P0078028	742 (aa)	-	-
MGP_129S1SvImJ_T0078019	-	3394	-	MGP_129S1SvImJ_P0078019	282 (aa)	-	O35134
MGP_129S1SvImJ_T0078021	-	1492	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078020	-	9216	-	MGP_129S1SvImJ_P0078020	1717 (aa)	-	-
MGP_129S1SvImJ_T0078023	-	359	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078022	-	3302	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078025	-	584	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078024	-	352	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078027	-	554	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078026	-	625	-	MGP_129S1SvImJ_P0078026	47 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0030866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030866	Polr1a	63	31.876	MGP_129S1SvImJ_G0021063	Polr3a	70	32.623
MGP_129S1SvImJ_G0030866	Polr1a	73	33.333	MGP_129S1SvImJ_G0018551	Polr2a	51	37.143