EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030975 (Gene tree)
Gene ID: -
Gene Symbol: Tia1
Alias: 2310050N03Rik|AI256674|TIA-1|Tia|mTIA-1
Full Name: cytotoxic granule-associated RNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 31773 bases
Position: chr6:87685450-87717222
Accession: 107914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0078565	RRM_1	PF00076.22	4.5e-68	1	3
MGP_129S1SvImJ_P0078565	RRM_1	PF00076.22	4.5e-68	2	3
MGP_129S1SvImJ_P0078565	RRM_1	PF00076.22	4.5e-68	3	3
MGP_129S1SvImJ_P0078559	RRM_1	PF00076.22	1.9e-67	1	3
MGP_129S1SvImJ_P0078559	RRM_1	PF00076.22	1.9e-67	2	3
MGP_129S1SvImJ_P0078559	RRM_1	PF00076.22	1.9e-67	3	3
MGP_129S1SvImJ_P0078552	RRM_1	PF00076.22	2.1e-67	1	3
MGP_129S1SvImJ_P0078552	RRM_1	PF00076.22	2.1e-67	2	3
MGP_129S1SvImJ_P0078552	RRM_1	PF00076.22	2.1e-67	3	3
MGP_129S1SvImJ_P0078551	RRM_1	PF00076.22	2.1e-67	1	3
MGP_129S1SvImJ_P0078551	RRM_1	PF00076.22	2.1e-67	2	3
MGP_129S1SvImJ_P0078551	RRM_1	PF00076.22	2.1e-67	3	3
MGP_129S1SvImJ_P0078560	RRM_1	PF00076.22	2.3e-58	1	3
MGP_129S1SvImJ_P0078560	RRM_1	PF00076.22	2.3e-58	2	3
MGP_129S1SvImJ_P0078560	RRM_1	PF00076.22	2.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0078574	-	877	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078577	-	585	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078575	-	2530	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078564	-	1178	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078565	-	3107	-	MGP_129S1SvImJ_P0078565	377 (aa)	-	-
MGP_129S1SvImJ_T0078566	-	864	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078567	-	823	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078560	-	1444	-	MGP_129S1SvImJ_P0078560	285 (aa)	-	-
MGP_129S1SvImJ_T0078561	-	1290	-	MGP_129S1SvImJ_P0078561	93 (aa)	-	-
MGP_129S1SvImJ_T0078562	-	797	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078563	-	4325	-	MGP_129S1SvImJ_P0078563	212 (aa)	-	-
MGP_129S1SvImJ_T0078573	-	627	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078568	-	1901	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078569	-	2664	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078572	-	758	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078557	-	1203	-	MGP_129S1SvImJ_P0078557	133 (aa)	-	-
MGP_129S1SvImJ_T0078556	-	612	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078551	-	4476	XM_006505889	MGP_129S1SvImJ_P0078551	386 (aa)	XP_006505952	P52912
MGP_129S1SvImJ_T0078576	-	716	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078553	-	934	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078552	-	1789	-	MGP_129S1SvImJ_P0078552	385 (aa)	-	-
MGP_129S1SvImJ_T0078555	-	4420	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078554	-	422	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078571	-	750	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078570	-	706	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078559	-	3129	-	MGP_129S1SvImJ_P0078559	375 (aa)	-	-
MGP_129S1SvImJ_T0078558	-	3854	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078578	-	597	-	MGP_129S1SvImJ_P0078578	105 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0030975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030975	Tia1	83	35.443	MGP_129S1SvImJ_G0025332	Celf2	51	35.443
MGP_129S1SvImJ_G0030975	Tia1	71	32.836	MGP_129S1SvImJ_G0017560	Celf5	89	32.184
MGP_129S1SvImJ_G0030975	Tia1	78	36.000	MGP_129S1SvImJ_G0022725	Ncbp2	51	36.000
MGP_129S1SvImJ_G0030975	Tia1	84	34.247	MGP_129S1SvImJ_G0036044	Pabpc5	93	33.333
MGP_129S1SvImJ_G0030975	Tia1	89	34.615	MGP_129S1SvImJ_G0028445	Elavl2	96	34.615
MGP_129S1SvImJ_G0030975	Tia1	77	35.870	MGP_129S1SvImJ_G0027624	Rbm8a	54	35.870
MGP_129S1SvImJ_G0030975	Tia1	80	34.043	MGP_129S1SvImJ_G0035748	Rbmx	98	34.409
MGP_129S1SvImJ_G0030975	Tia1	95	30.000	MGP_129S1SvImJ_G0027190	Pabpc4l	95	30.539
MGP_129S1SvImJ_G0030975	Tia1	80	37.778	MGP_129S1SvImJ_G0017486	Cirbp	91	35.714
MGP_129S1SvImJ_G0030975	Tia1	87	38.095	MGP_129S1SvImJ_G0026834	Pabpc1l	59	38.095
MGP_129S1SvImJ_G0030975	Tia1	97	86.992	MGP_129S1SvImJ_G0033083	Tial1	100	87.440
MGP_129S1SvImJ_G0030975	Tia1	93	38.667	MGP_129S1SvImJ_G0027553	Celf3	76	38.462
MGP_129S1SvImJ_G0030975	Tia1	70	41.333	MGP_129S1SvImJ_G0035541	Rbm3	99	35.955
MGP_129S1SvImJ_G0030975	Tia1	95	33.835	MGP_129S1SvImJ_G0024369	Pabpc2	57	35.443
MGP_129S1SvImJ_G0030975	Tia1	87	38.095	MGP_129S1SvImJ_G0021796	Pabpc1	57	38.095
MGP_129S1SvImJ_G0030975	Tia1	98	31.169	MGP_129S1SvImJ_G0034474	Elavl3	90	37.179
MGP_129S1SvImJ_G0030975	Tia1	85	36.000	MGP_129S1SvImJ_G0034902	Celf6	62	32.955
MGP_129S1SvImJ_G0030975	Tia1	96	36.905	MGP_129S1SvImJ_G0023139	Pabpc6	58	36.905
MGP_129S1SvImJ_G0030975	Tia1	85	30.405	MGP_129S1SvImJ_G0024673	-	70	30.405
MGP_129S1SvImJ_G0030975	Tia1	60	31.285	MGP_129S1SvImJ_G0028868	Trnau1ap	79	30.198
MGP_129S1SvImJ_G0030975	Tia1	98	32.895	MGP_129S1SvImJ_G0028576	Elavl4	94	35.897
MGP_129S1SvImJ_G0030975	Tia1	79	35.165	MGP_129S1SvImJ_G0033806	-	73	35.165
MGP_129S1SvImJ_G0030975	Tia1	87	32.911	MGP_129S1SvImJ_G0024209	Celf4	63	30.682
MGP_129S1SvImJ_G0030975	Tia1	78	39.394	MGP_129S1SvImJ_G0028739	Pabpc4	100	39.394
MGP_129S1SvImJ_G0030975	Tia1	99	31.579	MGP_129S1SvImJ_G0033333	Elavl1	95	32.298