EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0030978 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp1
Alias: WBP17|[a]CP-1|alphaCP-1|hnRNP E1
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 1832 bases
Position: chr6:87816038-87817869
Accession: 1345635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0078589	KH_1	PF00013.29	2.7e-51	1	3
MGP_129S1SvImJ_P0078589	KH_1	PF00013.29	2.7e-51	2	3
MGP_129S1SvImJ_P0078589	KH_1	PF00013.29	2.7e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0078589	-	1832	-	MGP_129S1SvImJ_P0078589	356 (aa)	-	P60335

Gene Model

Click here to download MGP_129S1SvImJ_G0030978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0030978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0030978	Pcbp1	85	42.857	MGP_129S1SvImJ_G0020633	Hnrnpk	78	31.724
MGP_129S1SvImJ_G0030978	Pcbp1	70	40.541	MGP_129S1SvImJ_G0019714	Nova1	57	40.541
MGP_129S1SvImJ_G0030978	Pcbp1	100	81.744	MGP_129S1SvImJ_G0022415	Pcbp2	100	81.744
MGP_129S1SvImJ_G0030978	Pcbp1	66	41.558	MGP_129S1SvImJ_G0031749	-	51	41.558
MGP_129S1SvImJ_G0030978	Pcbp1	60	31.169	MGP_129S1SvImJ_G0025586	Fubp3	88	32.370
MGP_129S1SvImJ_G0030978	Pcbp1	70	43.243	MGP_129S1SvImJ_G0022666	Igf2bp2	69	33.696
MGP_129S1SvImJ_G0030978	Pcbp1	98	53.541	MGP_129S1SvImJ_G0035232	Pcbp4	96	66.055
MGP_129S1SvImJ_G0030978	Pcbp1	99	68.033	MGP_129S1SvImJ_G0017390	Pcbp3	99	65.873
MGP_129S1SvImJ_G0030978	Pcbp1	69	34.667	MGP_129S1SvImJ_G0023949	Khsrp	54	34.667