EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031001 (Gene tree)
Gene ID: -
Gene Symbol: Cnbp
Alias: AA408710|Cnbp1|Znf9
Full Name: cellular nucleic acid binding protein
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 8494 bases
Position: chr6:89215244-89223737
Accession: 88431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	1	7
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	2	7
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	3	7
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	4	7
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	5	7
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	6	7
MGP_129S1SvImJ_P0078689	zf-CCHC	PF00098.23	3.5e-52	7	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	1	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	2	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	3	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	4	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	5	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	6	7
MGP_129S1SvImJ_P0078690	zf-CCHC	PF00098.23	3.7e-52	7	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	1	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	2	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	3	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	4	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	5	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	6	7
MGP_129S1SvImJ_P0078687	zf-CCHC	PF00098.23	5e-52	7	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	1	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	2	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	3	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	4	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	5	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	6	7
MGP_129S1SvImJ_P0078691	zf-CCHC	PF00098.23	5e-52	7	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	1	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	2	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	3	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	4	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	5	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	6	7
MGP_129S1SvImJ_P0078688	zf-CCHC	PF00098.23	6.5e-52	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0078687	-	2175	XM_006505479	MGP_129S1SvImJ_P0078687	177 (aa)	XP_006505542	P53996
MGP_129S1SvImJ_T0078689	-	1661	-	MGP_129S1SvImJ_P0078689	170 (aa)	-	-
MGP_129S1SvImJ_T0078688	-	2178	-	MGP_129S1SvImJ_P0078688	178 (aa)	-	-
MGP_129S1SvImJ_T0078694	-	985	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078695	-	690	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078692	-	915	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078693	-	911	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0078690	-	1614	-	MGP_129S1SvImJ_P0078690	171 (aa)	-	-
MGP_129S1SvImJ_T0078691	-	952	-	MGP_129S1SvImJ_P0078691	177 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031001	Cnbp	100	75.294	MGP_129S1SvImJ_G0035986	Zcchc13	100	75.294