EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031005 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 46778 bases
Position: chr6:89379854-89426631
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0078714	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_129S1SvImJ_P0078715	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_129S1SvImJ_P0078716	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_129S1SvImJ_P0078717	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_129S1SvImJ_P0078718	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_129S1SvImJ_P0078720	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_129S1SvImJ_P0078719	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0078717	-	1657	-	MGP_129S1SvImJ_P0078717	207 (aa)	-	-
MGP_129S1SvImJ_T0078716	-	1859	-	MGP_129S1SvImJ_P0078716	207 (aa)	-	-
MGP_129S1SvImJ_T0078715	-	2031	-	MGP_129S1SvImJ_P0078715	207 (aa)	-	-
MGP_129S1SvImJ_T0078714	-	2159	-	MGP_129S1SvImJ_P0078714	207 (aa)	-	P51150
MGP_129S1SvImJ_T0078719	-	424	-	MGP_129S1SvImJ_P0078719	88 (aa)	-	-
MGP_129S1SvImJ_T0078718	-	1275	-	MGP_129S1SvImJ_P0078718	207 (aa)	-	-
MGP_129S1SvImJ_T0078720	-	550	-	MGP_129S1SvImJ_P0078720	98 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031005	Rab7	79	31.169	MGP_129S1SvImJ_G0035169	Mras	80	33.333
MGP_129S1SvImJ_G0031005	Rab7	99	40.206	MGP_129S1SvImJ_G0019866	Rab15	81	33.520
MGP_129S1SvImJ_G0031005	Rab7	83	35.714	MGP_129S1SvImJ_G0019210	Arl4d	58	32.520
MGP_129S1SvImJ_G0031005	Rab7	94	35.870	MGP_129S1SvImJ_G0019563	Dnajc27	60	36.145
MGP_129S1SvImJ_G0031005	Rab7	94	43.478	MGP_129S1SvImJ_G0015902	Rab23	70	33.918
MGP_129S1SvImJ_G0031005	Rab7	91	47.191	MGP_129S1SvImJ_G0032574	Rab6a	94	36.000
MGP_129S1SvImJ_G0031005	Rab7	92	42.222	MGP_129S1SvImJ_G0032514	Rab30	88	38.043
MGP_129S1SvImJ_G0031005	Rab7	91	37.778	MGP_129S1SvImJ_G0035862	Rab39b	76	34.545
MGP_129S1SvImJ_G0031005	Rab7	98	60.417	MGP_129S1SvImJ_G0036106	Rab9b	99	53.202
MGP_129S1SvImJ_G0031005	Rab7	93	42.857	MGP_129S1SvImJ_G0034943	Rab11a	87	38.686
MGP_129S1SvImJ_G0031005	Rab7	100	37.374	MGP_129S1SvImJ_G0027198	Rab33b	79	36.559
MGP_129S1SvImJ_G0031005	Rab7	73	33.113	MGP_129S1SvImJ_G0027689	Nras	95	33.108
MGP_129S1SvImJ_G0031005	Rab7	97	35.789	MGP_129S1SvImJ_G0031586	Rasl2-9	75	33.728
MGP_129S1SvImJ_G0031005	Rab7	91	43.820	MGP_129S1SvImJ_G0025650	Rab14	83	40.310
MGP_129S1SvImJ_G0031005	Rab7	94	49.462	MGP_129S1SvImJ_G0019371	Rab37	76	41.071
MGP_129S1SvImJ_G0031005	Rab7	91	46.067	MGP_129S1SvImJ_G0021294	Rab2b	91	36.634
MGP_129S1SvImJ_G0031005	Rab7	90	48.864	MGP_129S1SvImJ_G0024132	Rab18	92	36.082
MGP_129S1SvImJ_G0031005	Rab7	66	32.117	MGP_129S1SvImJ_G0033214	Hras	96	30.808
MGP_129S1SvImJ_G0031005	Rab7	91	44.944	MGP_129S1SvImJ_G0027400	Rab25	75	39.157
MGP_129S1SvImJ_G0031005	Rab7	91	42.222	MGP_129S1SvImJ_G0035694	Rab33a	85	36.111
MGP_129S1SvImJ_G0031005	Rab7	90	48.864	MGP_129S1SvImJ_G0023988	Rab12	64	36.316
MGP_129S1SvImJ_G0031005	Rab7	93	42.857	MGP_129S1SvImJ_G0023535	Rab11b	89	38.686
MGP_129S1SvImJ_G0031005	Rab7	91	40.449	MGP_129S1SvImJ_G0022241	Rabl2	71	33.735
MGP_129S1SvImJ_G0031005	Rab7	76	33.121	MGP_129S1SvImJ_G0031479	Kras	87	33.929
MGP_129S1SvImJ_G0031005	Rab7	90	47.727	MGP_129S1SvImJ_G0019167	Rab5c	77	42.442
MGP_129S1SvImJ_G0031005	Rab7	92	46.667	MGP_129S1SvImJ_G0026959	Rab22a	82	40.854
MGP_129S1SvImJ_G0031005	Rab7	91	47.191	MGP_129S1SvImJ_G0035193	Rab6b	94	36.683
MGP_129S1SvImJ_G0031005	Rab7	92	43.333	MGP_129S1SvImJ_G0017350	Rab36	63	36.571
MGP_129S1SvImJ_G0031005	Rab7	97	45.263	MGP_129S1SvImJ_G0023887	Rab5a	81	40.782
MGP_129S1SvImJ_G0031005	Rab7	98	38.542	MGP_129S1SvImJ_G0024693	Rab1b	97	34.848
MGP_129S1SvImJ_G0031005	Rab7	91	44.944	MGP_129S1SvImJ_G0028039	Rab2a	84	36.269
MGP_129S1SvImJ_G0031005	Rab7	92	47.778	MGP_129S1SvImJ_G0023979	Rab31	82	44.512
MGP_129S1SvImJ_G0031005	Rab7	98	39.583	MGP_129S1SvImJ_G0018064	Rab1a	78	39.264