EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031180 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpf
Alias: 4833420I20Rik|AA407306|Hnrpf
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 25623 bases
Position: chr6:120618296-120643918
Accession: 2138741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0079631	zf-RNPHF	PF08080.12	1.8e-21	1	1
MGP_129S1SvImJ_P0079632	zf-RNPHF	PF08080.12	1.8e-21	1	1
MGP_129S1SvImJ_P0079631	RRM_1	PF00076.22	1.2e-14	1	1
MGP_129S1SvImJ_P0079632	RRM_1	PF00076.22	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0079629	-	515	XM_006506829	MGP_129S1SvImJ_P0079629	31 (aa)	XP_006506892	Q9Z2X1
MGP_129S1SvImJ_T0079631	-	1434	-	MGP_129S1SvImJ_P0079631	348 (aa)	-	-
MGP_129S1SvImJ_T0079630	-	391	-	MGP_129S1SvImJ_P0079630	14 (aa)	-	-
MGP_129S1SvImJ_T0079632	-	1510	-	MGP_129S1SvImJ_P0079632	348 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031180	Hnrnpf	99	63.478	MGP_129S1SvImJ_G0027044	Hnrnph2	80	63.478
MGP_129S1SvImJ_G0031180	Hnrnpf	77	81.034	MGP_129S1SvImJ_G0017310	Hnrnph3	77	45.136
MGP_129S1SvImJ_G0031180	Hnrnpf	74	61.404	MGP_129S1SvImJ_G0029711	Grsf1	78	61.404
MGP_129S1SvImJ_G0031180	Hnrnpf	99	64.638	MGP_129S1SvImJ_G0018249	Hnrnph1	80	64.638