EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031285 (Gene tree)
Gene ID: -
Gene Symbol: Chd4
Alias: 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075
Full Name: chromodomain helicase DNA binding protein 4
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 38197 bases
Position: chr6:128422183-128460379
Accession: 1344380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0080171	ResIII	PF04851.15	6.2e-10	1	1
MGP_129S1SvImJ_P0080172	ResIII	PF04851.15	6.6e-10	1	1
MGP_129S1SvImJ_P0080170	ResIII	PF04851.15	6.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0080170	-	6697	XM_006505280	MGP_129S1SvImJ_P0080170	1915 (aa)	XP_006505343	Q6PDQ2
MGP_129S1SvImJ_T0080171	-	6652	-	MGP_129S1SvImJ_P0080171	1902 (aa)	-	-
MGP_129S1SvImJ_T0080172	-	6537	-	MGP_129S1SvImJ_P0080172	1922 (aa)	-	-
MGP_129S1SvImJ_T0080173	-	369	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0080174	-	750	-	MGP_129S1SvImJ_P0080174	51 (aa)	-	-
MGP_129S1SvImJ_T0080175	-	618	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0080176	-	1332	-	MGP_129S1SvImJ_P0080176	444 (aa)	-	-
MGP_129S1SvImJ_T0080177	-	821	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031285	Chd4	95	70.529	MGP_129S1SvImJ_G0018528	Chd3	91	80.841
MGP_129S1SvImJ_G0031285	Chd4	96	72.367	MGP_129S1SvImJ_G0029181	Chd5	91	73.096