EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031505 (Gene tree)
Gene ID: -
Gene Symbol: Caprin2
Alias: C1qdc1|C1qdc1,GN Kiaa1873|Eeg1|RNG140|Rng140|rng140
Full Name: caprin family member 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 57691 bases
Position: chr6:153944764-154002454
Accession: 2448541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0081101	Caprin-1_C	PF12287.8	5.3e-116	1	1
MGP_129S1SvImJ_P0081099	Caprin-1_C	PF12287.8	8.7e-116	1	1
MGP_129S1SvImJ_P0081100	Caprin-1_C	PF12287.8	2.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0081098	-	1163	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081099	-	3697	-	MGP_129S1SvImJ_P0081099	1031 (aa)	-	-
MGP_129S1SvImJ_T0081108	-	740	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081102	-	3294	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081103	-	554	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081100	-	1035	-	MGP_129S1SvImJ_P0081100	171 (aa)	-	-
MGP_129S1SvImJ_T0081101	-	2952	-	MGP_129S1SvImJ_P0081101	812 (aa)	-	-
MGP_129S1SvImJ_T0081106	-	6281	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081107	-	598	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081104	-	896	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0081105	-	739	-	MGP_129S1SvImJ_P0081105	131 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031505	Caprin2	91	38.415	MGP_129S1SvImJ_G0026207	Caprin1	89	44.275