EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031749 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 38517 bases
Position: chr7:16859445-16897961
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0081896	KH_1	PF00013.29	4.5e-47	1	3
MGP_129S1SvImJ_P0081896	KH_1	PF00013.29	4.5e-47	2	3
MGP_129S1SvImJ_P0081896	KH_1	PF00013.29	4.5e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0081896	-	1479	-	MGP_129S1SvImJ_P0081896	492 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031749	-	54	37.681	MGP_129S1SvImJ_G0020633	Hnrnpk	57	37.681
MGP_129S1SvImJ_G0031749	-	51	41.558	MGP_129S1SvImJ_G0030978	Pcbp1	66	41.558
MGP_129S1SvImJ_G0031749	-	100	100.000	MGP_129S1SvImJ_G0031748	-	94	100.000
MGP_129S1SvImJ_G0031749	-	100	67.816	MGP_129S1SvImJ_G0019714	Nova1	64	73.333
MGP_129S1SvImJ_G0031749	-	54	36.765	MGP_129S1SvImJ_G0027988	Fubp1	61	36.765
MGP_129S1SvImJ_G0031749	-	54	41.538	MGP_129S1SvImJ_G0035232	Pcbp4	76	41.538
MGP_129S1SvImJ_G0031749	-	50	41.096	MGP_129S1SvImJ_G0022415	Pcbp2	68	41.096