EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0031990 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 17027 bases
Position: chr7:28797888-28814914
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_129S1SvImJ_P0082810	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_129S1SvImJ_P0082813	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_129S1SvImJ_P0082810	zf-met	PF12874.7	8.2e-08	1	1
MGP_129S1SvImJ_P0082813	zf-met	PF12874.7	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0082814	-	764	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0082811	-	689	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0082810	-	2537	XM_006539873	MGP_129S1SvImJ_P0082810	578 (aa)	XP_006539936	Q7TMN8
MGP_129S1SvImJ_T0082813	-	2744	-	MGP_129S1SvImJ_P0082813	578 (aa)	-	-
MGP_129S1SvImJ_T0082812	-	2982	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0031990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0031990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0031990	Zfp420	99	50.860	MGP_129S1SvImJ_G0032117	Zfp715	71	51.128
MGP_129S1SvImJ_G0031990	Zfp420	97	56.034	MGP_129S1SvImJ_G0031178	Zfp637	75	53.646
MGP_129S1SvImJ_G0031990	Zfp420	98	56.000	MGP_129S1SvImJ_G0020716	Zfp748	92	56.000
MGP_129S1SvImJ_G0031990	Zfp420	98	60.000	MGP_129S1SvImJ_G0020717	-	96	60.000
MGP_129S1SvImJ_G0031990	Zfp420	99	57.647	MGP_129S1SvImJ_G0020719	Zfp65	95	57.647
MGP_129S1SvImJ_G0031990	Zfp420	98	46.711	MGP_129S1SvImJ_G0030700	Repin1	93	46.711
MGP_129S1SvImJ_G0031990	Zfp420	99	49.458	MGP_129S1SvImJ_G0020699	Zfp759	90	50.000
MGP_129S1SvImJ_G0031990	Zfp420	98	56.187	MGP_129S1SvImJ_G0020698	Rslcan18	71	56.187
MGP_129S1SvImJ_G0031990	Zfp420	98	38.028	MGP_129S1SvImJ_G0031568	Zfp628	60	38.748
MGP_129S1SvImJ_G0031990	Zfp420	98	39.286	MGP_129S1SvImJ_G0026930	Zfp64	69	36.247
MGP_129S1SvImJ_G0031990	Zfp420	98	48.454	MGP_129S1SvImJ_G0029507	Zbtb49	89	50.000
MGP_129S1SvImJ_G0031990	Zfp420	98	37.309	MGP_129S1SvImJ_G0033983	Zfp319	93	36.842
MGP_129S1SvImJ_G0031990	Zfp420	98	36.677	MGP_129S1SvImJ_G0031853	Zfp574	93	37.533
MGP_129S1SvImJ_G0031990	Zfp420	98	59.717	MGP_129S1SvImJ_G0032116	Zfp141	64	59.717
MGP_129S1SvImJ_G0031990	Zfp420	98	51.613	MGP_129S1SvImJ_G0018399	Zfp867	82	51.613
MGP_129S1SvImJ_G0031990	Zfp420	95	59.426	MGP_129S1SvImJ_G0026463	Zfp661	72	59.426
MGP_129S1SvImJ_G0031990	Zfp420	99	53.722	MGP_129S1SvImJ_G0031815	Zfp112	59	53.722
MGP_129S1SvImJ_G0031990	Zfp420	99	56.311	MGP_129S1SvImJ_G0031816	Zfp235	72	56.311
MGP_129S1SvImJ_G0031990	Zfp420	99	47.059	MGP_129S1SvImJ_G0024602	Zfp236	80	46.512
MGP_129S1SvImJ_G0031990	Zfp420	98	49.524	MGP_129S1SvImJ_G0018349	Zfp672	89	49.524
MGP_129S1SvImJ_G0031990	Zfp420	97	44.706	MGP_129S1SvImJ_G0029048	Zbtb17	69	44.706
MGP_129S1SvImJ_G0031990	Zfp420	99	52.262	MGP_129S1SvImJ_G0026892	Zfp334	75	51.259
MGP_129S1SvImJ_G0031990	Zfp420	97	40.845	MGP_129S1SvImJ_G0023258	Zscan10	78	41.463
MGP_129S1SvImJ_G0031990	Zfp420	99	50.090	MGP_129S1SvImJ_G0023250	Zfp945	98	50.844
MGP_129S1SvImJ_G0031990	Zfp420	98	48.031	MGP_129S1SvImJ_G0029844	Gfi1	100	48.507
MGP_129S1SvImJ_G0031990	Zfp420	99	55.556	MGP_129S1SvImJ_G0031820	Zfp108	80	55.556
MGP_129S1SvImJ_G0031990	Zfp420	99	55.310	MGP_129S1SvImJ_G0031822	Zfp61	59	55.310
MGP_129S1SvImJ_G0031990	Zfp420	99	57.095	MGP_129S1SvImJ_G0031823	Zfp94	78	57.095
MGP_129S1SvImJ_G0031990	Zfp420	98	55.126	MGP_129S1SvImJ_G0023229	Zfp51	89	55.126
MGP_129S1SvImJ_G0031990	Zfp420	98	52.184	MGP_129S1SvImJ_G0023227	Zfp677	89	52.184
MGP_129S1SvImJ_G0031990	Zfp420	98	59.532	MGP_129S1SvImJ_G0018255	Zfp454	71	57.514
MGP_129S1SvImJ_G0031990	Zfp420	99	57.346	MGP_129S1SvImJ_G0034143	Zfp1	78	57.346
MGP_129S1SvImJ_G0031990	Zfp420	98	47.967	MGP_129S1SvImJ_G0033035	E430018J23Rik	67	47.967
MGP_129S1SvImJ_G0031990	Zfp420	99	55.755	MGP_129S1SvImJ_G0033032	Zfp768	51	55.714
MGP_129S1SvImJ_G0031990	Zfp420	99	60.328	MGP_129S1SvImJ_G0022013	Zfp251	78	60.328
MGP_129S1SvImJ_G0031990	Zfp420	99	37.634	MGP_129S1SvImJ_G0031576	Zfp865	80	37.634
MGP_129S1SvImJ_G0031990	Zfp420	95	30.691	MGP_129S1SvImJ_G0031577	-	66	31.343
MGP_129S1SvImJ_G0031990	Zfp420	95	41.722	MGP_129S1SvImJ_G0030834	Prdm5	91	48.387
MGP_129S1SvImJ_G0031990	Zfp420	99	53.968	MGP_129S1SvImJ_G0034481	Zfp872	86	53.351
MGP_129S1SvImJ_G0031990	Zfp420	98	49.750	MGP_129S1SvImJ_G0033765	Zfp882	85	49.750
MGP_129S1SvImJ_G0031990	Zfp420	100	53.831	MGP_129S1SvImJ_G0033764	Zfp709	84	54.095