EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0032514 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 91263 bases
Position: chr7:95304729-95395991
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0084981	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_129S1SvImJ_P0084982	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0084981	-	2041	XM_006508293	MGP_129S1SvImJ_P0084981	203 (aa)	XP_006508356	Q923S9
MGP_129S1SvImJ_T0084983	-	1304	-	MGP_129S1SvImJ_P0084983	175 (aa)	-	-
MGP_129S1SvImJ_T0084982	-	1406	-	MGP_129S1SvImJ_P0084982	203 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0032514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0032514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0032514	Rab30	84	34.503	MGP_129S1SvImJ_G0027689	Nras	96	34.932
MGP_129S1SvImJ_G0032514	Rab30	82	50.000	MGP_129S1SvImJ_G0024693	Rab1b	83	50.000
MGP_129S1SvImJ_G0032514	Rab30	82	31.737	MGP_129S1SvImJ_G0029356	Rheb	88	31.737
MGP_129S1SvImJ_G0032514	Rab30	87	33.146	MGP_129S1SvImJ_G0031479	Kras	93	33.146
MGP_129S1SvImJ_G0032514	Rab30	97	39.524	MGP_129S1SvImJ_G0023535	Rab11b	93	44.604
MGP_129S1SvImJ_G0032514	Rab30	86	42.529	MGP_129S1SvImJ_G0019866	Rab15	82	42.529
MGP_129S1SvImJ_G0032514	Rab30	79	42.857	MGP_129S1SvImJ_G0032574	Rab6a	77	42.857
MGP_129S1SvImJ_G0032514	Rab30	83	42.012	MGP_129S1SvImJ_G0019167	Rab5c	78	42.012
MGP_129S1SvImJ_G0032514	Rab30	81	33.735	MGP_129S1SvImJ_G0035169	Mras	79	33.735
MGP_129S1SvImJ_G0032514	Rab30	78	48.447	MGP_129S1SvImJ_G0035862	Rab39b	76	48.447
MGP_129S1SvImJ_G0032514	Rab30	81	47.059	MGP_129S1SvImJ_G0027198	Rab33b	74	47.059
MGP_129S1SvImJ_G0032514	Rab30	83	47.929	MGP_129S1SvImJ_G0024132	Rab18	82	47.929
MGP_129S1SvImJ_G0032514	Rab30	79	34.756	MGP_129S1SvImJ_G0022241	Rabl2	70	34.756
MGP_129S1SvImJ_G0032514	Rab30	87	37.500	MGP_129S1SvImJ_G0015902	Rab23	74	37.500
MGP_129S1SvImJ_G0032514	Rab30	97	37.981	MGP_129S1SvImJ_G0034943	Rab11a	91	44.604
MGP_129S1SvImJ_G0032514	Rab30	89	34.426	MGP_129S1SvImJ_G0033214	Hras	94	34.426
MGP_129S1SvImJ_G0032514	Rab30	81	32.317	MGP_129S1SvImJ_G0031586	Rasl2-9	75	32.317
MGP_129S1SvImJ_G0032514	Rab30	77	35.625	MGP_129S1SvImJ_G0018768	Rab34	62	35.625
MGP_129S1SvImJ_G0032514	Rab30	80	42.331	MGP_129S1SvImJ_G0026959	Rab22a	84	42.331
MGP_129S1SvImJ_G0032514	Rab30	78	38.272	MGP_129S1SvImJ_G0017350	Rab36	61	38.272
MGP_129S1SvImJ_G0032514	Rab30	76	42.857	MGP_129S1SvImJ_G0023979	Rab31	79	42.857
MGP_129S1SvImJ_G0032514	Rab30	97	41.546	MGP_129S1SvImJ_G0027400	Rab25	96	41.546
MGP_129S1SvImJ_G0032514	Rab30	79	41.615	MGP_129S1SvImJ_G0035193	Rab6b	77	41.615
MGP_129S1SvImJ_G0032514	Rab30	84	45.614	MGP_129S1SvImJ_G0021294	Rab2b	81	48.718
MGP_129S1SvImJ_G0032514	Rab30	79	39.157	MGP_129S1SvImJ_G0036106	Rab9b	82	39.157
MGP_129S1SvImJ_G0032514	Rab30	80	48.466	MGP_129S1SvImJ_G0019371	Rab37	75	48.466
MGP_129S1SvImJ_G0032514	Rab30	82	50.602	MGP_129S1SvImJ_G0018064	Rab1a	81	50.602
MGP_129S1SvImJ_G0032514	Rab30	88	38.043	MGP_129S1SvImJ_G0031005	Rab7	92	42.222
MGP_129S1SvImJ_G0032514	Rab30	88	47.778	MGP_129S1SvImJ_G0023988	Rab12	62	47.778
MGP_129S1SvImJ_G0032514	Rab30	81	51.176	MGP_129S1SvImJ_G0035694	Rab33a	72	51.176
MGP_129S1SvImJ_G0032514	Rab30	90	42.391	MGP_129S1SvImJ_G0028039	Rab2a	87	42.391
MGP_129S1SvImJ_G0032514	Rab30	89	40.556	MGP_129S1SvImJ_G0025650	Rab14	91	43.478
MGP_129S1SvImJ_G0032514	Rab30	86	43.678	MGP_129S1SvImJ_G0023887	Rab5a	81	43.678