EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0032574 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 38342 bases
Position: chr7:103499031-103537372
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0085237	MMR_HSR1	PF01926.23	9.2e-05	1	1
MGP_129S1SvImJ_P0085238	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0085238	-	3106	-	MGP_129S1SvImJ_P0085238	208 (aa)	-	-
MGP_129S1SvImJ_T0085239	-	567	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0085236	-	2613	-	MGP_129S1SvImJ_P0085236	175 (aa)	-	P35279
MGP_129S1SvImJ_T0085237	-	3210	-	MGP_129S1SvImJ_P0085237	208 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0032574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0032574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0032574	Rab6a	56	30.000	MGP_129S1SvImJ_G0019210	Arl4d	58	30.000
MGP_129S1SvImJ_G0032574	Rab6a	85	37.634	MGP_129S1SvImJ_G0018768	Rab34	72	37.634
MGP_129S1SvImJ_G0032574	Rab6a	76	32.500	MGP_129S1SvImJ_G0035169	Mras	76	32.500
MGP_129S1SvImJ_G0032574	Rab6a	94	36.232	MGP_129S1SvImJ_G0025650	Rab14	95	36.232
MGP_129S1SvImJ_G0032574	Rab6a	100	90.865	MGP_129S1SvImJ_G0035193	Rab6b	100	90.865
MGP_129S1SvImJ_G0032574	Rab6a	75	39.623	MGP_129S1SvImJ_G0035862	Rab39b	75	39.623
MGP_129S1SvImJ_G0032574	Rab6a	93	38.384	MGP_129S1SvImJ_G0024693	Rab1b	96	38.384
MGP_129S1SvImJ_G0032574	Rab6a	91	38.462	MGP_129S1SvImJ_G0028039	Rab2a	89	38.462
MGP_129S1SvImJ_G0032574	Rab6a	76	40.252	MGP_129S1SvImJ_G0023988	Rab12	55	40.252
MGP_129S1SvImJ_G0032574	Rab6a	94	38.384	MGP_129S1SvImJ_G0018064	Rab1a	94	38.384
MGP_129S1SvImJ_G0032574	Rab6a	77	40.828	MGP_129S1SvImJ_G0021294	Rab2b	79	43.421
MGP_129S1SvImJ_G0032574	Rab6a	76	39.873	MGP_129S1SvImJ_G0015902	Rab23	66	39.873
MGP_129S1SvImJ_G0032574	Rab6a	77	42.857	MGP_129S1SvImJ_G0032514	Rab30	79	42.857
MGP_129S1SvImJ_G0032574	Rab6a	81	39.053	MGP_129S1SvImJ_G0026959	Rab22a	87	39.053
MGP_129S1SvImJ_G0032574	Rab6a	75	32.911	MGP_129S1SvImJ_G0027689	Nras	98	33.557
MGP_129S1SvImJ_G0032574	Rab6a	94	36.000	MGP_129S1SvImJ_G0031005	Rab7	91	47.191
MGP_129S1SvImJ_G0032574	Rab6a	98	41.546	MGP_129S1SvImJ_G0023887	Rab5a	95	41.546
MGP_129S1SvImJ_G0032574	Rab6a	94	36.150	MGP_129S1SvImJ_G0017350	Rab36	80	36.150
MGP_129S1SvImJ_G0032574	Rab6a	80	38.922	MGP_129S1SvImJ_G0023979	Rab31	86	38.922
MGP_129S1SvImJ_G0032574	Rab6a	95	36.634	MGP_129S1SvImJ_G0024132	Rab18	94	36.634
MGP_129S1SvImJ_G0032574	Rab6a	79	33.721	MGP_129S1SvImJ_G0036106	Rab9b	84	33.721
MGP_129S1SvImJ_G0032574	Rab6a	90	36.458	MGP_129S1SvImJ_G0019866	Rab15	91	36.458
MGP_129S1SvImJ_G0032574	Rab6a	95	37.561	MGP_129S1SvImJ_G0035694	Rab33a	86	37.561
MGP_129S1SvImJ_G0032574	Rab6a	77	42.857	MGP_129S1SvImJ_G0019371	Rab37	75	42.857
MGP_129S1SvImJ_G0032574	Rab6a	77	30.769	MGP_129S1SvImJ_G0030380	Rasl11a	69	30.769
MGP_129S1SvImJ_G0032574	Rab6a	84	44.000	MGP_129S1SvImJ_G0019167	Rab5c	81	44.000
MGP_129S1SvImJ_G0032574	Rab6a	88	34.239	MGP_129S1SvImJ_G0027400	Rab25	86	34.239
MGP_129S1SvImJ_G0032574	Rab6a	94	35.784	MGP_129S1SvImJ_G0027198	Rab33b	86	35.784
MGP_129S1SvImJ_G0032574	Rab6a	88	31.915	MGP_129S1SvImJ_G0022241	Rabl2	83	31.915
MGP_129S1SvImJ_G0032574	Rab6a	75	38.217	MGP_129S1SvImJ_G0023535	Rab11b	91	37.778
MGP_129S1SvImJ_G0032574	Rab6a	75	32.278	MGP_129S1SvImJ_G0031479	Kras	83	32.278
MGP_129S1SvImJ_G0032574	Rab6a	75	35.625	MGP_129S1SvImJ_G0029356	Rheb	85	35.625
MGP_129S1SvImJ_G0032574	Rab6a	95	30.151	MGP_129S1SvImJ_G0033214	Hras	98	30.151
MGP_129S1SvImJ_G0032574	Rab6a	84	35.955	MGP_129S1SvImJ_G0034943	Rab11a	84	38.281