EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0032959 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 71846 bases
Position: chr7:127261265-127333110
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0086331	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_129S1SvImJ_P0086328	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0086329	-	3577	-	MGP_129S1SvImJ_P0086329	35 (aa)	-	-
MGP_129S1SvImJ_T0086328	-	8147	-	MGP_129S1SvImJ_P0086328	1880 (aa)	-	-
MGP_129S1SvImJ_T0086330	-	1783	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086331	-	5235	-	MGP_129S1SvImJ_P0086331	1397 (aa)	-	-
MGP_129S1SvImJ_T0086332	-	4312	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086333	-	939	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086327	-	310	-	MGP_129S1SvImJ_P0086327	53 (aa)	-	-
MGP_129S1SvImJ_T0086326	-	640	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086336	-	3297	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086335	-	463	-	MGP_129S1SvImJ_P0086335	154 (aa)	-	-
MGP_129S1SvImJ_T0086334	-	606	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0032959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0032959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0032959	Tnrc6a	98	44.685	MGP_129S1SvImJ_G0019448	Tnrc6c	99	40.570
MGP_129S1SvImJ_G0032959	Tnrc6a	99	39.671	MGP_129S1SvImJ_G0022103	Tnrc6b	98	37.120