EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033026 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 19930 bases
Position: chr7:131548725-131568654
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0086741	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_129S1SvImJ_P0086740	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_129S1SvImJ_P0086738	MMR_HSR1	PF01926.23	5.2e-08	1	1
MGP_129S1SvImJ_P0086737	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0086744	-	713	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086741	-	599	-	MGP_129S1SvImJ_P0086741	145 (aa)	-	-
MGP_129S1SvImJ_T0086740	-	706	-	MGP_129S1SvImJ_P0086740	186 (aa)	-	-
MGP_129S1SvImJ_T0086743	-	242	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086742	-	821	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086736	-	591	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0086737	-	1101	-	MGP_129S1SvImJ_P0086737	366 (aa)	-	-
MGP_129S1SvImJ_T0086738	-	1048	-	MGP_129S1SvImJ_P0086738	328 (aa)	-	-
MGP_129S1SvImJ_T0086739	-	789	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0033026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033026	Sept1	100	66.897	MGP_129S1SvImJ_G0018906	Sept4	94	66.514
MGP_129S1SvImJ_G0033026	Sept1	100	38.095	MGP_129S1SvImJ_G0018298	Sept8	76	36.765
MGP_129S1SvImJ_G0033026	Sept1	100	68.276	MGP_129S1SvImJ_G0022616	Sept5	93	63.068
MGP_129S1SvImJ_G0033026	Sept1	100	40.816	MGP_129S1SvImJ_G0029758	Sept11	76	40.762
MGP_129S1SvImJ_G0033026	Sept1	100	40.136	MGP_129S1SvImJ_G0035628	Sept6	76	41.349
MGP_129S1SvImJ_G0033026	Sept1	100	64.828	MGP_129S1SvImJ_G0016343	Sept2	100	60.748
MGP_129S1SvImJ_G0033026	Sept1	100	50.000	MGP_129S1SvImJ_G0019446	Sept9	83	46.000
MGP_129S1SvImJ_G0033026	Sept1	100	59.310	MGP_129S1SvImJ_G0034497	Sept7	76	49.709
MGP_129S1SvImJ_G0033026	Sept1	100	47.260	MGP_129S1SvImJ_G0022479	Sept12	77	43.775
MGP_129S1SvImJ_G0033026	Sept1	100	50.685	MGP_129S1SvImJ_G0022140	Sept3	86	46.575
MGP_129S1SvImJ_G0033026	Sept1	100	43.537	MGP_129S1SvImJ_G0017253	Sept10	71	40.064