EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033035 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 3947 bases
Position: chr7:131736683-131740629
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_129S1SvImJ_P0086763	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_129S1SvImJ_P0086763	zf-met	PF12874.7	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0086763	-	3324	XM_006507163	MGP_129S1SvImJ_P0086763	461 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_129S1SvImJ_G0033035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033035	E430018J23Rik	62	45.000	MGP_129S1SvImJ_G0029507	Zbtb49	64	47.945
MGP_129S1SvImJ_G0033035	E430018J23Rik	71	37.838	MGP_129S1SvImJ_G0030834	Prdm5	74	37.838
MGP_129S1SvImJ_G0033035	E430018J23Rik	86	43.798	MGP_129S1SvImJ_G0033765	Zfp882	99	43.798
MGP_129S1SvImJ_G0033035	E430018J23Rik	91	45.283	MGP_129S1SvImJ_G0033764	Zfp709	99	45.660
MGP_129S1SvImJ_G0033035	E430018J23Rik	57	44.086	MGP_129S1SvImJ_G0031853	Zfp574	71	38.961
MGP_129S1SvImJ_G0033035	E430018J23Rik	71	32.389	MGP_129S1SvImJ_G0026930	Zfp64	70	32.389
MGP_129S1SvImJ_G0033035	E430018J23Rik	79	45.070	MGP_129S1SvImJ_G0032117	Zfp715	74	45.070
MGP_129S1SvImJ_G0033035	E430018J23Rik	79	47.000	MGP_129S1SvImJ_G0032116	Zfp141	68	46.360
MGP_129S1SvImJ_G0033035	E430018J23Rik	57	44.503	MGP_129S1SvImJ_G0031178	Zfp637	84	44.330
MGP_129S1SvImJ_G0033035	E430018J23Rik	85	44.318	MGP_129S1SvImJ_G0020716	Zfp748	99	44.318
MGP_129S1SvImJ_G0033035	E430018J23Rik	86	39.583	MGP_129S1SvImJ_G0018399	Zfp867	95	39.583
MGP_129S1SvImJ_G0033035	E430018J23Rik	61	44.498	MGP_129S1SvImJ_G0030700	Repin1	92	44.076
MGP_129S1SvImJ_G0033035	E430018J23Rik	60	48.421	MGP_129S1SvImJ_G0031568	Zfp628	60	47.264
MGP_129S1SvImJ_G0033035	E430018J23Rik	60	35.593	MGP_129S1SvImJ_G0031576	Zfp865	72	35.593
MGP_129S1SvImJ_G0033035	E430018J23Rik	61	42.798	MGP_129S1SvImJ_G0018349	Zfp672	90	42.105
MGP_129S1SvImJ_G0033035	E430018J23Rik	67	47.967	MGP_129S1SvImJ_G0031990	Zfp420	98	47.967
MGP_129S1SvImJ_G0033035	E430018J23Rik	59	42.177	MGP_129S1SvImJ_G0024602	Zfp236	58	42.177
MGP_129S1SvImJ_G0033035	E430018J23Rik	74	47.809	MGP_129S1SvImJ_G0031815	Zfp112	63	47.809
MGP_129S1SvImJ_G0033035	E430018J23Rik	89	48.879	MGP_129S1SvImJ_G0031816	Zfp235	99	48.879
MGP_129S1SvImJ_G0033035	E430018J23Rik	69	36.765	MGP_129S1SvImJ_G0033983	Zfp319	93	39.245
MGP_129S1SvImJ_G0033035	E430018J23Rik	54	38.421	MGP_129S1SvImJ_G0018987	Zfp652	51	32.808
MGP_129S1SvImJ_G0033035	E430018J23Rik	86	43.600	MGP_129S1SvImJ_G0026892	Zfp334	99	43.600
MGP_129S1SvImJ_G0033035	E430018J23Rik	64	43.254	MGP_129S1SvImJ_G0023258	Zscan10	78	43.254
MGP_129S1SvImJ_G0033035	E430018J23Rik	92	42.073	MGP_129S1SvImJ_G0023250	Zfp945	98	42.073
MGP_129S1SvImJ_G0033035	E430018J23Rik	62	45.299	MGP_129S1SvImJ_G0031820	Zfp108	73	45.299
MGP_129S1SvImJ_G0033035	E430018J23Rik	59	48.341	MGP_129S1SvImJ_G0031822	Zfp61	51	48.341
MGP_129S1SvImJ_G0033035	E430018J23Rik	85	46.119	MGP_129S1SvImJ_G0031823	Zfp94	96	46.119
MGP_129S1SvImJ_G0033035	E430018J23Rik	91	44.245	MGP_129S1SvImJ_G0023229	Zfp51	95	44.545
MGP_129S1SvImJ_G0033035	E430018J23Rik	92	41.985	MGP_129S1SvImJ_G0023227	Zfp677	99	41.985
MGP_129S1SvImJ_G0033035	E430018J23Rik	90	50.382	MGP_129S1SvImJ_G0022013	Zfp251	94	50.382
MGP_129S1SvImJ_G0033035	E430018J23Rik	86	41.045	MGP_129S1SvImJ_G0034481	Zfp872	99	40.755
MGP_129S1SvImJ_G0033035	E430018J23Rik	60	46.452	MGP_129S1SvImJ_G0020717	-	94	46.452
MGP_129S1SvImJ_G0033035	E430018J23Rik	63	39.863	MGP_129S1SvImJ_G0020719	Zfp65	99	39.863
MGP_129S1SvImJ_G0033035	E430018J23Rik	87	42.510	MGP_129S1SvImJ_G0020699	Zfp759	99	42.510
MGP_129S1SvImJ_G0033035	E430018J23Rik	90	47.390	MGP_129S1SvImJ_G0020698	Rslcan18	82	47.390
MGP_129S1SvImJ_G0033035	E430018J23Rik	89	45.385	MGP_129S1SvImJ_G0018255	Zfp454	99	44.019
MGP_129S1SvImJ_G0033035	E430018J23Rik	60	42.197	MGP_129S1SvImJ_G0029844	Gfi1	99	45.038
MGP_129S1SvImJ_G0033035	E430018J23Rik	86	35.381	MGP_129S1SvImJ_G0034143	Zfp1	98	35.381
MGP_129S1SvImJ_G0033035	E430018J23Rik	89	47.895	MGP_129S1SvImJ_G0026463	Zfp661	94	42.286
MGP_129S1SvImJ_G0033035	E430018J23Rik	60	47.511	MGP_129S1SvImJ_G0033032	Zfp768	50	47.321