EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033083 (Gene tree)
Gene ID: -
Gene Symbol: Tial1
Alias: 5330433G13Rik|AL033329|TIAR|mTIAR
Full Name: Tia1 cytotoxic granule-associated RNA binding protein-like 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 23270 bases
Position: chr7:132868420-132891689
Accession: 107913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0087018	RRM_1	PF00076.22	2.2e-63	1	3
MGP_129S1SvImJ_P0087018	RRM_1	PF00076.22	2.2e-63	2	3
MGP_129S1SvImJ_P0087018	RRM_1	PF00076.22	2.2e-63	3	3
MGP_129S1SvImJ_P0087021	RRM_1	PF00076.22	2.2e-63	1	3
MGP_129S1SvImJ_P0087021	RRM_1	PF00076.22	2.2e-63	2	3
MGP_129S1SvImJ_P0087021	RRM_1	PF00076.22	2.2e-63	3	3
MGP_129S1SvImJ_P0087015	RRM_1	PF00076.22	3.1e-60	1	3
MGP_129S1SvImJ_P0087015	RRM_1	PF00076.22	3.1e-60	2	3
MGP_129S1SvImJ_P0087015	RRM_1	PF00076.22	3.1e-60	3	3
MGP_129S1SvImJ_P0087017	RRM_1	PF00076.22	7.6e-51	1	3
MGP_129S1SvImJ_P0087017	RRM_1	PF00076.22	7.6e-51	2	3
MGP_129S1SvImJ_P0087017	RRM_1	PF00076.22	7.6e-51	3	3
MGP_129S1SvImJ_P0087023	RRM_1	PF00076.22	1.8e-26	1	2
MGP_129S1SvImJ_P0087023	RRM_1	PF00076.22	1.8e-26	2	2
MGP_129S1SvImJ_P0087022	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0087028	-	674	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0087027	-	1806	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0087026	-	804	-	MGP_129S1SvImJ_P0087026	140 (aa)	-	-
MGP_129S1SvImJ_T0087025	-	560	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0087024	-	784	-	MGP_129S1SvImJ_P0087024	41 (aa)	-	-
MGP_129S1SvImJ_T0087023	-	1344	-	MGP_129S1SvImJ_P0087023	244 (aa)	-	-
MGP_129S1SvImJ_T0087022	-	562	-	MGP_129S1SvImJ_P0087022	107 (aa)	-	-
MGP_129S1SvImJ_T0087021	-	1580	-	MGP_129S1SvImJ_P0087021	375 (aa)	-	-
MGP_129S1SvImJ_T0087020	-	2319	-	MGP_129S1SvImJ_P0087020	135 (aa)	-	-
MGP_129S1SvImJ_T0087016	-	4278	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0087017	-	2830	-	MGP_129S1SvImJ_P0087017	336 (aa)	-	-
MGP_129S1SvImJ_T0087015	-	4463	XM_006507570	MGP_129S1SvImJ_P0087015	392 (aa)	XP_006507633	P70318
MGP_129S1SvImJ_T0087018	-	2033	-	MGP_129S1SvImJ_P0087018	375 (aa)	-	-
MGP_129S1SvImJ_T0087019	-	953	-	MGP_129S1SvImJ_P0087019	106 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0033083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033083	Tial1	73	37.179	MGP_129S1SvImJ_G0034474	Elavl3	90	37.179
MGP_129S1SvImJ_G0033083	Tial1	78	30.769	MGP_129S1SvImJ_G0028739	Pabpc4	100	34.167
MGP_129S1SvImJ_G0033083	Tial1	100	87.440	MGP_129S1SvImJ_G0030975	Tia1	97	86.992
MGP_129S1SvImJ_G0033083	Tial1	84	30.088	MGP_129S1SvImJ_G0024673	-	70	30.345
MGP_129S1SvImJ_G0033083	Tial1	73	32.000	MGP_129S1SvImJ_G0027329	Rbm46	52	30.000
MGP_129S1SvImJ_G0033083	Tial1	99	31.618	MGP_129S1SvImJ_G0027190	Pabpc4l	94	33.333
MGP_129S1SvImJ_G0033083	Tial1	81	31.111	MGP_129S1SvImJ_G0019470	Rbfox3	53	31.868
MGP_129S1SvImJ_G0033083	Tial1	73	35.897	MGP_129S1SvImJ_G0028576	Elavl4	88	35.897
MGP_129S1SvImJ_G0033083	Tial1	67	30.769	MGP_129S1SvImJ_G0033333	Elavl1	95	30.769
MGP_129S1SvImJ_G0033083	Tial1	62	32.184	MGP_129S1SvImJ_G0022725	Ncbp2	71	33.333
MGP_129S1SvImJ_G0033083	Tial1	92	32.500	MGP_129S1SvImJ_G0024369	Pabpc2	50	35.036
MGP_129S1SvImJ_G0033083	Tial1	94	31.008	MGP_129S1SvImJ_G0021796	Pabpc1	56	34.783
MGP_129S1SvImJ_G0033083	Tial1	94	31.783	MGP_129S1SvImJ_G0023139	Pabpc6	56	34.014
MGP_129S1SvImJ_G0033083	Tial1	53	32.143	MGP_129S1SvImJ_G0034902	Celf6	54	31.818
MGP_129S1SvImJ_G0033083	Tial1	73	33.019	MGP_129S1SvImJ_G0028868	Trnau1ap	60	32.386
MGP_129S1SvImJ_G0033083	Tial1	72	34.615	MGP_129S1SvImJ_G0028445	Elavl2	93	34.615
MGP_129S1SvImJ_G0033083	Tial1	67	40.244	MGP_129S1SvImJ_G0017486	Cirbp	85	40.244
MGP_129S1SvImJ_G0033083	Tial1	69	31.469	MGP_129S1SvImJ_G0029969	Msi1	56	41.379
MGP_129S1SvImJ_G0033083	Tial1	64	31.461	MGP_129S1SvImJ_G0035748	Rbmx	90	32.258
MGP_129S1SvImJ_G0033083	Tial1	65	31.481	MGP_129S1SvImJ_G0025332	Celf2	61	34.177
MGP_129S1SvImJ_G0033083	Tial1	64	31.461	MGP_129S1SvImJ_G0033806	-	76	31.579
MGP_129S1SvImJ_G0033083	Tial1	81	37.333	MGP_129S1SvImJ_G0027553	Celf3	70	34.091