EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033699 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 10071 bases
Position: chr8:70555943-70566013
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0089172	ResIII	PF04851.15	4.2e-06	1	1
MGP_129S1SvImJ_P0089172	DEAD	PF00270.29	7.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0089177	-	296	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089176	-	1447	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089175	-	1101	-	MGP_129S1SvImJ_P0089175	354 (aa)	-	-
MGP_129S1SvImJ_T0089174	-	599	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089173	-	2163	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089172	-	2137	-	MGP_129S1SvImJ_P0089172	480 (aa)	-	Q4FZF3

Gene Model

Click here to download MGP_129S1SvImJ_G0033699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033699	Ddx49	59	33.175	MGP_129S1SvImJ_G0018018	Ddx56	94	32.627
MGP_129S1SvImJ_G0033699	Ddx49	95	33.138	MGP_129S1SvImJ_G0016541	Ddx59	61	30.216
MGP_129S1SvImJ_G0033699	Ddx49	95	31.953	MGP_129S1SvImJ_G0019478	Eif4a3	91	32.190
MGP_129S1SvImJ_G0033699	Ddx49	94	32.335	MGP_129S1SvImJ_G0018546	Eif4a1	86	32.335
MGP_129S1SvImJ_G0033699	Ddx49	98	32.741	MGP_129S1SvImJ_G0025533	Ddx31	63	31.136
MGP_129S1SvImJ_G0033699	Ddx49	93	30.175	MGP_129S1SvImJ_G0029890	Ddx51	71	30.573
MGP_129S1SvImJ_G0033699	Ddx49	90	36.919	MGP_129S1SvImJ_G0035571	Ddx3x	55	35.789
MGP_129S1SvImJ_G0033699	Ddx49	97	49.271	MGP_129S1SvImJ_G0031412	Ddx47	95	46.050
MGP_129S1SvImJ_G0033699	Ddx49	93	34.897	MGP_129S1SvImJ_G0035068	Ddx43	60	34.913
MGP_129S1SvImJ_G0033699	Ddx49	95	33.616	MGP_129S1SvImJ_G0020938	Ddx4	52	33.687
MGP_129S1SvImJ_G0033699	Ddx49	92	38.066	MGP_129S1SvImJ_G0016412	Ddx18	56	36.148
MGP_129S1SvImJ_G0033699	Ddx49	97	38.286	MGP_129S1SvImJ_G0026906	Ddx27	59	33.696
MGP_129S1SvImJ_G0033699	Ddx49	94	32.239	MGP_129S1SvImJ_G0022678	Eif4a2	92	32.546
MGP_129S1SvImJ_G0033699	Ddx49	96	40.909	MGP_129S1SvImJ_G0019605	Ddx1	63	40.909
MGP_129S1SvImJ_G0033699	Ddx49	96	33.333	MGP_129S1SvImJ_G0020602	Ddx41	62	32.921
MGP_129S1SvImJ_G0033699	Ddx49	91	39.521	MGP_129S1SvImJ_G0022077	Ddx17	56	37.903
MGP_129S1SvImJ_G0033699	Ddx49	76	30.081	MGP_129S1SvImJ_G0018863	Ddx52	61	30.081
MGP_129S1SvImJ_G0033699	Ddx49	90	37.500	MGP_129S1SvImJ_G0016921	D1Pas1	55	36.316
MGP_129S1SvImJ_G0033699	Ddx49	92	33.238	MGP_129S1SvImJ_G0030100	Ddx55	56	33.056
MGP_129S1SvImJ_G0033699	Ddx49	97	33.046	MGP_129S1SvImJ_G0023633	Ddx39b	86	32.891
MGP_129S1SvImJ_G0033699	Ddx49	92	32.402	MGP_129S1SvImJ_G0034074	Ddx28	68	31.649
MGP_129S1SvImJ_G0033699	Ddx49	97	33.333	MGP_129S1SvImJ_G0033839	Ddx39	87	33.156
MGP_129S1SvImJ_G0033699	Ddx49	66	32.323	MGP_129S1SvImJ_G0034133	Ddx19b	70	32.990
MGP_129S1SvImJ_G0033699	Ddx49	97	35.211	MGP_129S1SvImJ_G0019313	Ddx5	76	34.062
MGP_129S1SvImJ_G0033699	Ddx49	95	32.743	MGP_129S1SvImJ_G0034714	Ddx6	75	33.333