EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033709 (Gene tree)
Gene ID: -
Gene Symbol: Uba52
Alias: D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc|Ubcep2
Full Name: ubiquitin A-52 residue ribosomal protein fusion product 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 2866 bases
Position: chr8:70776744-70779609
Accession: 98887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0089211	Ribosomal_L40e	PF01020.17	9.8e-33	1	1
MGP_129S1SvImJ_P0089212	Ribosomal_L40e	PF01020.17	9.8e-33	1	1
MGP_129S1SvImJ_P0089213	Ribosomal_L40e	PF01020.17	9.8e-33	1	1
MGP_129S1SvImJ_P0089215	Ribosomal_L40e	PF01020.17	9.8e-33	1	1
MGP_129S1SvImJ_P0089217	Ribosomal_L40e	PF01020.17	9.8e-33	1	1
MGP_129S1SvImJ_P0089218	Ribosomal_L40e	PF01020.17	9.8e-33	1	1
MGP_129S1SvImJ_P0089219	Ribosomal_L40e	PF01020.17	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0089217	-	520	-	MGP_129S1SvImJ_P0089217	128 (aa)	-	-
MGP_129S1SvImJ_T0089214	-	646	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089215	-	541	-	MGP_129S1SvImJ_P0089215	128 (aa)	-	-
MGP_129S1SvImJ_T0089212	-	711	-	MGP_129S1SvImJ_P0089212	128 (aa)	-	-
MGP_129S1SvImJ_T0089213	-	698	-	MGP_129S1SvImJ_P0089213	128 (aa)	-	-
MGP_129S1SvImJ_T0089211	-	706	-	MGP_129S1SvImJ_P0089211	128 (aa)	-	P62984
MGP_129S1SvImJ_T0089218	-	387	-	MGP_129S1SvImJ_P0089218	128 (aa)	-	-
MGP_129S1SvImJ_T0089219	-	611	-	MGP_129S1SvImJ_P0089219	96 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0033709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033709	Uba52	100	90.625	MGP_129S1SvImJ_G0024259	Gm5239	100	90.625
MGP_129S1SvImJ_G0033709	Uba52	100	100.000	MGP_129S1SvImJ_G0033710	Kxd1	55	100.000
MGP_129S1SvImJ_G0033709	Uba52	85	35.366	MGP_129S1SvImJ_G0024739	-	60	35.366
MGP_129S1SvImJ_G0033709	Uba52	100	97.917	MGP_129S1SvImJ_G0034405	-	86	98.305