EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033873 (Gene tree)
Gene ID: -
Gene Symbol: Calr
Alias: CRT|Calregulin
Full Name: calreticulin
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 5086 bases
Position: chr8:85765451-85770536
Accession: 88252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0089727	Calreticulin	PF00262.18	7.6e-81	1	2
MGP_129S1SvImJ_P0089727	Calreticulin	PF00262.18	7.6e-81	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0089727	-	2181	-	MGP_129S1SvImJ_P0089727	416 (aa)	-	P14211
MGP_129S1SvImJ_T0089730	-	721	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089728	-	943	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0089729	-	855	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0033873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033873	Calr	79	36.598	MGP_129S1SvImJ_G0033831	Clgn	63	36.598
MGP_129S1SvImJ_G0033873	Calr	82	66.181	MGP_129S1SvImJ_G0028568	Calr4	77	66.667
MGP_129S1SvImJ_G0033873	Calr	90	51.475	MGP_129S1SvImJ_G0033781	Calr3	85	53.392