EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0033924 (Gene tree)
Gene ID: -
Gene Symbol: Sall1
Alias: Msal-3
Full Name: sal-like 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 16995 bases
Position: chr8:90148725-90165719
Accession: 1889585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0089910	zf-C2H2	PF00096.26	8.1e-34	1	6
MGP_129S1SvImJ_P0089910	zf-C2H2	PF00096.26	8.1e-34	2	6
MGP_129S1SvImJ_P0089910	zf-C2H2	PF00096.26	8.1e-34	3	6
MGP_129S1SvImJ_P0089910	zf-C2H2	PF00096.26	8.1e-34	4	6
MGP_129S1SvImJ_P0089910	zf-C2H2	PF00096.26	8.1e-34	5	6
MGP_129S1SvImJ_P0089910	zf-C2H2	PF00096.26	8.1e-34	6	6
MGP_129S1SvImJ_P0089910	zf-met	PF12874.7	1.6e-24	1	5
MGP_129S1SvImJ_P0089910	zf-met	PF12874.7	1.6e-24	2	5
MGP_129S1SvImJ_P0089910	zf-met	PF12874.7	1.6e-24	3	5
MGP_129S1SvImJ_P0089910	zf-met	PF12874.7	1.6e-24	4	5
MGP_129S1SvImJ_P0089910	zf-met	PF12874.7	1.6e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0089910	-	5259	XM_006531238	MGP_129S1SvImJ_P0089910	1323 (aa)	XP_006531301	Q6P5E3

Gene Model

Click here to download MGP_129S1SvImJ_G0033924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0033924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0033924	Sall1	67	53.704	MGP_129S1SvImJ_G0024602	Zfp236	66	53.704
MGP_129S1SvImJ_G0033924	Sall1	95	64.706	MGP_129S1SvImJ_G0026929	Sall4	100	64.706
MGP_129S1SvImJ_G0033924	Sall1	99	65.306	MGP_129S1SvImJ_G0024599	Sall3	99	65.306