EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0034143 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 30287 bases
Position: chr8:114447428-114477714
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	1	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	2	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	3	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	4	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	5	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	6	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	7	8
MGP_129S1SvImJ_P0090534	zf-C2H2	PF00096.26	2.2e-51	8	8
MGP_129S1SvImJ_P0090534	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0090534	-	1871	XM_011248348	MGP_129S1SvImJ_P0090534	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_129S1SvImJ_G0034143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0034143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0034143	Zfp1	98	45.113	MGP_129S1SvImJ_G0034481	Zfp872	99	45.113
MGP_129S1SvImJ_G0034143	Zfp1	99	42.769	MGP_129S1SvImJ_G0033765	Zfp882	99	45.349
MGP_129S1SvImJ_G0034143	Zfp1	67	39.791	MGP_129S1SvImJ_G0031576	Zfp865	80	39.286
MGP_129S1SvImJ_G0034143	Zfp1	71	56.818	MGP_129S1SvImJ_G0032116	Zfp141	63	56.818
MGP_129S1SvImJ_G0034143	Zfp1	98	47.059	MGP_129S1SvImJ_G0022013	Zfp251	94	47.059
MGP_129S1SvImJ_G0034143	Zfp1	99	48.828	MGP_129S1SvImJ_G0018255	Zfp454	98	48.828
MGP_129S1SvImJ_G0034143	Zfp1	91	55.319	MGP_129S1SvImJ_G0031816	Zfp235	80	55.319
MGP_129S1SvImJ_G0034143	Zfp1	80	57.078	MGP_129S1SvImJ_G0031815	Zfp112	72	57.078
MGP_129S1SvImJ_G0034143	Zfp1	99	46.071	MGP_129S1SvImJ_G0033764	Zfp709	99	47.303
MGP_129S1SvImJ_G0034143	Zfp1	99	40.144	MGP_129S1SvImJ_G0018399	Zfp867	95	39.600
MGP_129S1SvImJ_G0034143	Zfp1	78	57.346	MGP_129S1SvImJ_G0031990	Zfp420	99	57.346
MGP_129S1SvImJ_G0034143	Zfp1	77	57.042	MGP_129S1SvImJ_G0031178	Zfp637	91	57.042
MGP_129S1SvImJ_G0034143	Zfp1	98	35.381	MGP_129S1SvImJ_G0033035	E430018J23Rik	86	35.381
MGP_129S1SvImJ_G0034143	Zfp1	75	40.183	MGP_129S1SvImJ_G0033983	Zfp319	90	40.183
MGP_129S1SvImJ_G0034143	Zfp1	79	46.460	MGP_129S1SvImJ_G0023258	Zscan10	83	46.053
MGP_129S1SvImJ_G0034143	Zfp1	99	52.036	MGP_129S1SvImJ_G0023250	Zfp945	99	52.036
MGP_129S1SvImJ_G0034143	Zfp1	78	61.905	MGP_129S1SvImJ_G0031822	Zfp61	59	61.905
MGP_129S1SvImJ_G0034143	Zfp1	60	43.478	MGP_129S1SvImJ_G0029844	Gfi1	100	46.457
MGP_129S1SvImJ_G0034143	Zfp1	63	49.485	MGP_129S1SvImJ_G0029507	Zbtb49	76	48.611
MGP_129S1SvImJ_G0034143	Zfp1	79	40.594	MGP_129S1SvImJ_G0031853	Zfp574	71	40.594
MGP_129S1SvImJ_G0034143	Zfp1	63	39.716	MGP_129S1SvImJ_G0030700	Repin1	93	39.716
MGP_129S1SvImJ_G0034143	Zfp1	67	40.167	MGP_129S1SvImJ_G0030834	Prdm5	67	50.847
MGP_129S1SvImJ_G0034143	Zfp1	64	43.137	MGP_129S1SvImJ_G0026930	Zfp64	70	43.137
MGP_129S1SvImJ_G0034143	Zfp1	80	52.252	MGP_129S1SvImJ_G0033032	Zfp768	51	52.018
MGP_129S1SvImJ_G0034143	Zfp1	99	49.519	MGP_129S1SvImJ_G0023229	Zfp51	95	49.519
MGP_129S1SvImJ_G0034143	Zfp1	99	45.076	MGP_129S1SvImJ_G0023227	Zfp677	99	52.263
MGP_129S1SvImJ_G0034143	Zfp1	67	44.545	MGP_129S1SvImJ_G0024602	Zfp236	60	44.545
MGP_129S1SvImJ_G0034143	Zfp1	98	50.185	MGP_129S1SvImJ_G0031823	Zfp94	96	50.185
MGP_129S1SvImJ_G0034143	Zfp1	100	49.035	MGP_129S1SvImJ_G0031820	Zfp108	99	50.862
MGP_129S1SvImJ_G0034143	Zfp1	99	48.548	MGP_129S1SvImJ_G0020698	Rslcan18	86	48.548
MGP_129S1SvImJ_G0034143	Zfp1	98	38.214	MGP_129S1SvImJ_G0020699	Zfp759	99	38.214
MGP_129S1SvImJ_G0034143	Zfp1	67	46.559	MGP_129S1SvImJ_G0018349	Zfp672	90	46.559
MGP_129S1SvImJ_G0034143	Zfp1	80	45.769	MGP_129S1SvImJ_G0020719	Zfp65	91	45.769
MGP_129S1SvImJ_G0034143	Zfp1	68	49.239	MGP_129S1SvImJ_G0020717	-	89	49.239
MGP_129S1SvImJ_G0034143	Zfp1	98	49.145	MGP_129S1SvImJ_G0020716	Zfp748	99	49.145
MGP_129S1SvImJ_G0034143	Zfp1	100	42.953	MGP_129S1SvImJ_G0026892	Zfp334	99	54.028
MGP_129S1SvImJ_G0034143	Zfp1	98	41.429	MGP_129S1SvImJ_G0026463	Zfp661	96	41.429
MGP_129S1SvImJ_G0034143	Zfp1	98	51.440	MGP_129S1SvImJ_G0032117	Zfp715	95	51.440
MGP_129S1SvImJ_G0034143	Zfp1	60	46.429	MGP_129S1SvImJ_G0031568	Zfp628	60	46.073
MGP_129S1SvImJ_G0034143	Zfp1	67	42.083	MGP_129S1SvImJ_G0029048	Zbtb17	54	46.512