EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0034481 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 14560 bases
Position: chr9:19485735-19500294
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	1	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	2	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	3	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	4	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	5	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	6	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	7	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	8	9
MGP_129S1SvImJ_P0091501	zf-C2H2	PF00096.26	6.2e-50	9	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_129S1SvImJ_P0091500	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_129S1SvImJ_P0091501	zf-met	PF12874.7	9e-05	1	1
MGP_129S1SvImJ_P0091500	zf-met	PF12874.7	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0091501	-	1395	-	MGP_129S1SvImJ_P0091501	464 (aa)	-	-
MGP_129S1SvImJ_T0091500	-	2958	-	MGP_129S1SvImJ_P0091500	465 (aa)	-	F7APL9

Gene Model

Click here to download MGP_129S1SvImJ_G0034481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0034481's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0034481	Zfp872	83	41.964	MGP_129S1SvImJ_G0029048	Zbtb17	56	42.638
MGP_129S1SvImJ_G0034481	Zfp872	99	53.571	MGP_129S1SvImJ_G0022013	Zfp251	68	54.027
MGP_129S1SvImJ_G0034481	Zfp872	87	38.342	MGP_129S1SvImJ_G0018987	Zfp652	69	36.054
MGP_129S1SvImJ_G0034481	Zfp872	95	51.220	MGP_129S1SvImJ_G0032117	Zfp715	75	51.220
MGP_129S1SvImJ_G0034481	Zfp872	95	53.521	MGP_129S1SvImJ_G0032116	Zfp141	59	52.901
MGP_129S1SvImJ_G0034481	Zfp872	82	34.140	MGP_129S1SvImJ_G0033983	Zfp319	90	34.722
MGP_129S1SvImJ_G0034481	Zfp872	99	40.755	MGP_129S1SvImJ_G0033035	E430018J23Rik	86	41.045
MGP_129S1SvImJ_G0034481	Zfp872	84	44.156	MGP_129S1SvImJ_G0031576	Zfp865	78	35.776
MGP_129S1SvImJ_G0034481	Zfp872	97	39.935	MGP_129S1SvImJ_G0023258	Zscan10	80	39.935
MGP_129S1SvImJ_G0034481	Zfp872	99	43.333	MGP_129S1SvImJ_G0023250	Zfp945	95	44.904
MGP_129S1SvImJ_G0034481	Zfp872	99	46.193	MGP_129S1SvImJ_G0020699	Zfp759	99	46.000
MGP_129S1SvImJ_G0034481	Zfp872	99	53.118	MGP_129S1SvImJ_G0018399	Zfp867	95	53.187
MGP_129S1SvImJ_G0034481	Zfp872	99	43.631	MGP_129S1SvImJ_G0023229	Zfp51	94	43.719
MGP_129S1SvImJ_G0034481	Zfp872	93	34.726	MGP_129S1SvImJ_G0018349	Zfp672	100	40.000
MGP_129S1SvImJ_G0034481	Zfp872	99	40.530	MGP_129S1SvImJ_G0030834	Prdm5	82	40.076
MGP_129S1SvImJ_G0034481	Zfp872	96	53.982	MGP_129S1SvImJ_G0031178	Zfp637	88	53.982
MGP_129S1SvImJ_G0034481	Zfp872	86	53.351	MGP_129S1SvImJ_G0031990	Zfp420	99	53.968
MGP_129S1SvImJ_G0034481	Zfp872	88	52.280	MGP_129S1SvImJ_G0031815	Zfp112	60	52.665
MGP_129S1SvImJ_G0034481	Zfp872	94	48.159	MGP_129S1SvImJ_G0031816	Zfp235	75	48.159
MGP_129S1SvImJ_G0034481	Zfp872	99	46.667	MGP_129S1SvImJ_G0018255	Zfp454	98	46.667
MGP_129S1SvImJ_G0034481	Zfp872	84	48.162	MGP_129S1SvImJ_G0033032	Zfp768	51	47.426
MGP_129S1SvImJ_G0034481	Zfp872	84	52.000	MGP_129S1SvImJ_G0020719	Zfp65	97	52.000
MGP_129S1SvImJ_G0034481	Zfp872	99	47.684	MGP_129S1SvImJ_G0020716	Zfp748	99	48.459
MGP_129S1SvImJ_G0034481	Zfp872	90	52.713	MGP_129S1SvImJ_G0020717	-	93	52.713
MGP_129S1SvImJ_G0034481	Zfp872	99	41.827	MGP_129S1SvImJ_G0026892	Zfp334	99	41.928
MGP_129S1SvImJ_G0034481	Zfp872	99	45.113	MGP_129S1SvImJ_G0034143	Zfp1	98	45.113
MGP_129S1SvImJ_G0034481	Zfp872	100	50.368	MGP_129S1SvImJ_G0020698	Rslcan18	80	47.959
MGP_129S1SvImJ_G0034481	Zfp872	80	41.477	MGP_129S1SvImJ_G0029844	Gfi1	100	44.030
MGP_129S1SvImJ_G0034481	Zfp872	96	33.159	MGP_129S1SvImJ_G0030700	Repin1	98	33.159
MGP_129S1SvImJ_G0034481	Zfp872	86	49.333	MGP_129S1SvImJ_G0031820	Zfp108	99	49.333
MGP_129S1SvImJ_G0034481	Zfp872	94	58.140	MGP_129S1SvImJ_G0031822	Zfp61	63	58.140
MGP_129S1SvImJ_G0034481	Zfp872	99	45.552	MGP_129S1SvImJ_G0031823	Zfp94	96	45.552
MGP_129S1SvImJ_G0034481	Zfp872	81	47.191	MGP_129S1SvImJ_G0031568	Zfp628	60	46.114
MGP_129S1SvImJ_G0034481	Zfp872	94	40.800	MGP_129S1SvImJ_G0024602	Zfp236	60	44.318
MGP_129S1SvImJ_G0034481	Zfp872	99	45.773	MGP_129S1SvImJ_G0023227	Zfp677	98	45.773
MGP_129S1SvImJ_G0034481	Zfp872	99	50.284	MGP_129S1SvImJ_G0033765	Zfp882	97	44.991
MGP_129S1SvImJ_G0034481	Zfp872	99	56.369	MGP_129S1SvImJ_G0033764	Zfp709	99	56.369
MGP_129S1SvImJ_G0034481	Zfp872	84	46.226	MGP_129S1SvImJ_G0031853	Zfp574	93	46.226
MGP_129S1SvImJ_G0034481	Zfp872	99	48.746	MGP_129S1SvImJ_G0026463	Zfp661	94	48.507
MGP_129S1SvImJ_G0034481	Zfp872	80	34.050	MGP_129S1SvImJ_G0026930	Zfp64	71	34.082
MGP_129S1SvImJ_G0034481	Zfp872	80	44.330	MGP_129S1SvImJ_G0029507	Zbtb49	78	44.444