EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0034714 (Gene tree)
Gene ID: -
Gene Symbol: Ddx6
Alias: 1110001P04Rik|C430015D01Rik|E230023J21Rik|HLR2|Hlr2|Rck|mRCK/P54|p54|rck
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 40808 bases
Position: chr9:43113748-43154555
Accession: 104976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0092049	DEAD	PF00270.29	1.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0092050	-	2977	-	MGP_129S1SvImJ_P0092050	482 (aa)	-	-
MGP_129S1SvImJ_T0092049	-	5351	XM_011242391	MGP_129S1SvImJ_P0092049	482 (aa)	XP_011240693	P54823

Gene Model

Click here to download MGP_129S1SvImJ_G0034714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0034714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0034714	Ddx6	75	33.333	MGP_129S1SvImJ_G0033699	Ddx49	95	32.743
MGP_129S1SvImJ_G0034714	Ddx6	77	31.159	MGP_129S1SvImJ_G0022305	Ddx23	51	31.175
MGP_129S1SvImJ_G0034714	Ddx6	82	34.750	MGP_129S1SvImJ_G0033839	Ddx39	96	34.223
MGP_129S1SvImJ_G0034714	Ddx6	78	37.566	MGP_129S1SvImJ_G0019478	Eif4a3	91	37.566
MGP_129S1SvImJ_G0034714	Ddx6	76	31.915	MGP_129S1SvImJ_G0018863	Ddx52	63	31.915
MGP_129S1SvImJ_G0034714	Ddx6	71	32.782	MGP_129S1SvImJ_G0020938	Ddx4	51	32.782
MGP_129S1SvImJ_G0034714	Ddx6	54	31.834	MGP_129S1SvImJ_G0034132	Ddx19a	78	31.834
MGP_129S1SvImJ_G0034714	Ddx6	54	35.106	MGP_129S1SvImJ_G0034133	Ddx19b	67	35.106
MGP_129S1SvImJ_G0034714	Ddx6	69	40.678	MGP_129S1SvImJ_G0019605	Ddx1	53	40.678
MGP_129S1SvImJ_G0034714	Ddx6	74	30.894	MGP_129S1SvImJ_G0022077	Ddx17	58	30.971
MGP_129S1SvImJ_G0034714	Ddx6	79	33.419	MGP_129S1SvImJ_G0027718	Ddx20	50	32.767
MGP_129S1SvImJ_G0034714	Ddx6	71	31.742	MGP_129S1SvImJ_G0020602	Ddx41	57	32.022
MGP_129S1SvImJ_G0034714	Ddx6	69	32.402	MGP_129S1SvImJ_G0016921	D1Pas1	54	32.402
MGP_129S1SvImJ_G0034714	Ddx6	74	30.025	MGP_129S1SvImJ_G0018018	Ddx56	83	33.981
MGP_129S1SvImJ_G0034714	Ddx6	74	31.234	MGP_129S1SvImJ_G0030100	Ddx55	61	31.234
MGP_129S1SvImJ_G0034714	Ddx6	79	32.987	MGP_129S1SvImJ_G0031412	Ddx47	93	31.759
MGP_129S1SvImJ_G0034714	Ddx6	67	37.500	MGP_129S1SvImJ_G0018546	Eif4a1	86	37.500
MGP_129S1SvImJ_G0034714	Ddx6	77	31.771	MGP_129S1SvImJ_G0035068	Ddx43	59	31.771
MGP_129S1SvImJ_G0034714	Ddx6	74	33.784	MGP_129S1SvImJ_G0034536	Ddx25	78	34.555
MGP_129S1SvImJ_G0034714	Ddx6	80	30.256	MGP_129S1SvImJ_G0016541	Ddx59	62	30.256
MGP_129S1SvImJ_G0034714	Ddx6	69	31.755	MGP_129S1SvImJ_G0035571	Ddx3x	54	31.755
MGP_129S1SvImJ_G0034714	Ddx6	79	35.659	MGP_129S1SvImJ_G0023633	Ddx39b	90	35.659
MGP_129S1SvImJ_G0034714	Ddx6	68	30.678	MGP_129S1SvImJ_G0019313	Ddx5	65	30.678
MGP_129S1SvImJ_G0034714	Ddx6	66	30.699	MGP_129S1SvImJ_G0016412	Ddx18	50	30.699
MGP_129S1SvImJ_G0034714	Ddx6	77	38.441	MGP_129S1SvImJ_G0022678	Eif4a2	91	38.441