EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0034902 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 32087 bases
Position: chr9:58931896-58963982
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0092654	RRM_1	PF00076.22	2.1e-51	1	3
MGP_129S1SvImJ_P0092654	RRM_1	PF00076.22	2.1e-51	2	3
MGP_129S1SvImJ_P0092654	RRM_1	PF00076.22	2.1e-51	3	3
MGP_129S1SvImJ_P0092652	RRM_1	PF00076.22	2.6e-51	1	3
MGP_129S1SvImJ_P0092652	RRM_1	PF00076.22	2.6e-51	2	3
MGP_129S1SvImJ_P0092652	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0092652	-	2947	-	MGP_129S1SvImJ_P0092652	481 (aa)	-	-
MGP_129S1SvImJ_T0092653	-	2898	-	MGP_129S1SvImJ_P0092653	162 (aa)	-	-
MGP_129S1SvImJ_T0092651	-	3061	XM_006511540	MGP_129S1SvImJ_P0092651	182 (aa)	XP_006511603	Q7TN33
MGP_129S1SvImJ_T0092656	-	591	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0092654	-	4575	-	MGP_129S1SvImJ_P0092654	460 (aa)	-	-
MGP_129S1SvImJ_T0092655	-	449	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0034902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0034902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0034902	Celf6	91	45.567	MGP_129S1SvImJ_G0025332	Celf2	79	80.952
MGP_129S1SvImJ_G0034902	Celf6	79	31.250	MGP_129S1SvImJ_G0030734	Hnrnpa2b1	66	32.143
MGP_129S1SvImJ_G0034902	Celf6	68	37.113	MGP_129S1SvImJ_G0028739	Pabpc4	53	37.113
MGP_129S1SvImJ_G0034902	Celf6	75	85.401	MGP_129S1SvImJ_G0017560	Celf5	93	80.645
MGP_129S1SvImJ_G0034902	Celf6	54	35.802	MGP_129S1SvImJ_G0017849	Rbms2	50	35.802
MGP_129S1SvImJ_G0034902	Celf6	95	35.802	MGP_129S1SvImJ_G0028576	Elavl4	85	40.741
MGP_129S1SvImJ_G0034902	Celf6	73	39.062	MGP_129S1SvImJ_G0023139	Pabpc6	64	39.062
MGP_129S1SvImJ_G0034902	Celf6	54	31.193	MGP_129S1SvImJ_G0033806	-	81	36.986
MGP_129S1SvImJ_G0034902	Celf6	91	45.549	MGP_129S1SvImJ_G0026137	Celf1	98	45.135
MGP_129S1SvImJ_G0034902	Celf6	57	44.444	MGP_129S1SvImJ_G0033333	Elavl1	97	44.444
MGP_129S1SvImJ_G0034902	Celf6	100	67.200	MGP_129S1SvImJ_G0024209	Celf4	99	67.066
MGP_129S1SvImJ_G0034902	Celf6	57	42.308	MGP_129S1SvImJ_G0034474	Elavl3	80	41.975
MGP_129S1SvImJ_G0034902	Celf6	75	85.526	MGP_129S1SvImJ_G0027553	Celf3	81	87.368
MGP_129S1SvImJ_G0034902	Celf6	66	32.500	MGP_129S1SvImJ_G0018269	Hnrnpab	65	31.414
MGP_129S1SvImJ_G0034902	Celf6	52	42.105	MGP_129S1SvImJ_G0035401	Rbms3	82	42.105
MGP_129S1SvImJ_G0034902	Celf6	51	34.483	MGP_129S1SvImJ_G0036044	Pabpc5	63	34.483
MGP_129S1SvImJ_G0034902	Celf6	54	31.818	MGP_129S1SvImJ_G0033083	Tial1	53	32.143
MGP_129S1SvImJ_G0034902	Celf6	62	32.955	MGP_129S1SvImJ_G0030975	Tia1	85	36.000
MGP_129S1SvImJ_G0034902	Celf6	89	37.037	MGP_129S1SvImJ_G0028445	Elavl2	78	40.741