EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0034943 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 22482 bases
Position: chr9:64396600-64419081
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0092831	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_129S1SvImJ_P0092832	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_129S1SvImJ_P0092830	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0092827	-	603	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0092826	-	726	-	MGP_129S1SvImJ_P0092826	86 (aa)	-	P62492
MGP_129S1SvImJ_T0092829	-	397	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0092828	-	500	-	MGP_129S1SvImJ_P0092828	86 (aa)	-	-
MGP_129S1SvImJ_T0092832	-	595	-	MGP_129S1SvImJ_P0092832	155 (aa)	-	-
MGP_129S1SvImJ_T0092833	-	695	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0092830	-	651	-	MGP_129S1SvImJ_P0092830	216 (aa)	-	-
MGP_129S1SvImJ_T0092831	-	462	-	MGP_129S1SvImJ_P0092831	153 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0034943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0034943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0034943	Rab11a	86	34.586	MGP_129S1SvImJ_G0029356	Rheb	89	32.927
MGP_129S1SvImJ_G0034943	Rab11a	95	54.110	MGP_129S1SvImJ_G0025650	Rab14	97	54.422
MGP_129S1SvImJ_G0034943	Rab11a	84	38.281	MGP_129S1SvImJ_G0032574	Rab6a	84	35.955
MGP_129S1SvImJ_G0034943	Rab11a	91	56.835	MGP_129S1SvImJ_G0028039	Rab2a	81	54.971
MGP_129S1SvImJ_G0034943	Rab11a	100	50.000	MGP_129S1SvImJ_G0018064	Rab1a	85	52.299
MGP_129S1SvImJ_G0034943	Rab11a	91	56.115	MGP_129S1SvImJ_G0021294	Rab2b	95	51.366
MGP_129S1SvImJ_G0034943	Rab11a	81	31.746	MGP_129S1SvImJ_G0035169	Mras	85	32.768
MGP_129S1SvImJ_G0034943	Rab11a	68	30.065	MGP_129S1SvImJ_G0016517	Arl8a	77	30.065
MGP_129S1SvImJ_G0034943	Rab11a	79	39.669	MGP_129S1SvImJ_G0031586	Rasl2-9	70	36.364
MGP_129S1SvImJ_G0034943	Rab11a	78	31.746	MGP_129S1SvImJ_G0019699	Arl4a	60	31.746
MGP_129S1SvImJ_G0034943	Rab11a	89	43.885	MGP_129S1SvImJ_G0019371	Rab37	77	45.181
MGP_129S1SvImJ_G0034943	Rab11a	91	44.604	MGP_129S1SvImJ_G0032514	Rab30	97	37.981
MGP_129S1SvImJ_G0034943	Rab11a	88	49.265	MGP_129S1SvImJ_G0035862	Rab39b	82	46.857
MGP_129S1SvImJ_G0034943	Rab11a	89	42.143	MGP_129S1SvImJ_G0036106	Rab9b	86	41.040
MGP_129S1SvImJ_G0034943	Rab11a	94	35.780	MGP_129S1SvImJ_G0017350	Rab36	79	35.780
MGP_129S1SvImJ_G0034943	Rab11a	93	41.379	MGP_129S1SvImJ_G0027198	Rab33b	85	37.799
MGP_129S1SvImJ_G0034943	Rab11a	87	38.686	MGP_129S1SvImJ_G0031005	Rab7	93	42.857
MGP_129S1SvImJ_G0034943	Rab11a	81	34.921	MGP_129S1SvImJ_G0027689	Nras	95	37.931
MGP_129S1SvImJ_G0034943	Rab11a	88	31.293	MGP_129S1SvImJ_G0030380	Rasl11a	60	31.293
MGP_129S1SvImJ_G0034943	Rab11a	75	40.000	MGP_129S1SvImJ_G0022241	Rabl2	67	37.908
MGP_129S1SvImJ_G0034943	Rab11a	100	96.078	MGP_129S1SvImJ_G0023535	Rab11b	97	100.000
MGP_129S1SvImJ_G0034943	Rab11a	81	34.127	MGP_129S1SvImJ_G0031479	Kras	87	37.725
MGP_129S1SvImJ_G0034943	Rab11a	97	52.201	MGP_129S1SvImJ_G0024693	Rab1b	84	55.357
MGP_129S1SvImJ_G0034943	Rab11a	88	49.630	MGP_129S1SvImJ_G0019167	Rab5c	90	41.262
MGP_129S1SvImJ_G0034943	Rab11a	81	34.921	MGP_129S1SvImJ_G0033214	Hras	85	37.654
MGP_129S1SvImJ_G0034943	Rab11a	90	43.796	MGP_129S1SvImJ_G0023988	Rab12	70	37.799
MGP_129S1SvImJ_G0034943	Rab11a	90	43.066	MGP_129S1SvImJ_G0026959	Rab22a	81	42.038
MGP_129S1SvImJ_G0034943	Rab11a	95	70.748	MGP_129S1SvImJ_G0027400	Rab25	99	62.150
MGP_129S1SvImJ_G0034943	Rab11a	74	30.303	MGP_129S1SvImJ_G0019563	Dnajc27	60	30.303
MGP_129S1SvImJ_G0034943	Rab11a	92	34.752	MGP_129S1SvImJ_G0015902	Rab23	80	32.984
MGP_129S1SvImJ_G0034943	Rab11a	90	40.426	MGP_129S1SvImJ_G0035694	Rab33a	74	39.665
MGP_129S1SvImJ_G0034943	Rab11a	93	48.252	MGP_129S1SvImJ_G0024132	Rab18	78	47.531
MGP_129S1SvImJ_G0034943	Rab11a	91	46.763	MGP_129S1SvImJ_G0019866	Rab15	93	40.887
MGP_129S1SvImJ_G0034943	Rab11a	88	48.148	MGP_129S1SvImJ_G0023887	Rab5a	91	41.951
MGP_129S1SvImJ_G0034943	Rab11a	88	35.821	MGP_129S1SvImJ_G0035193	Rab6b	77	35.404
MGP_129S1SvImJ_G0034943	Rab11a	76	31.667	MGP_129S1SvImJ_G0019210	Arl4d	58	31.667
MGP_129S1SvImJ_G0034943	Rab11a	93	42.254	MGP_129S1SvImJ_G0023979	Rab31	86	41.071