EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0035068 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 28126 bases
Position: chr9:78900435-78928560
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0093339	KH_1	PF00013.29	4.5e-12	1	1
MGP_129S1SvImJ_P0093339	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0093339	-	2207	-	MGP_129S1SvImJ_P0093339	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_129S1SvImJ_G0035068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0035068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0035068	Ddx43	53	32.044	MGP_129S1SvImJ_G0030100	Ddx55	58	32.044
MGP_129S1SvImJ_G0035068	Ddx43	63	40.757	MGP_129S1SvImJ_G0022305	Ddx23	54	40.757
MGP_129S1SvImJ_G0035068	Ddx43	68	44.519	MGP_129S1SvImJ_G0019313	Ddx5	89	45.040
MGP_129S1SvImJ_G0035068	Ddx43	60	34.913	MGP_129S1SvImJ_G0033699	Ddx49	93	34.897
MGP_129S1SvImJ_G0035068	Ddx43	64	36.941	MGP_129S1SvImJ_G0020602	Ddx41	65	37.232
MGP_129S1SvImJ_G0035068	Ddx43	63	34.135	MGP_129S1SvImJ_G0018863	Ddx52	69	34.135
MGP_129S1SvImJ_G0035068	Ddx43	68	43.527	MGP_129S1SvImJ_G0022077	Ddx17	67	43.527
MGP_129S1SvImJ_G0035068	Ddx43	60	39.012	MGP_129S1SvImJ_G0016921	D1Pas1	61	39.012
MGP_129S1SvImJ_G0035068	Ddx43	54	31.831	MGP_129S1SvImJ_G0019478	Eif4a3	84	31.831
MGP_129S1SvImJ_G0035068	Ddx43	54	30.159	MGP_129S1SvImJ_G0034074	Ddx28	70	30.423
MGP_129S1SvImJ_G0035068	Ddx43	54	33.799	MGP_129S1SvImJ_G0017303	Ddx50	53	33.799
MGP_129S1SvImJ_G0035068	Ddx43	62	33.333	MGP_129S1SvImJ_G0016541	Ddx59	64	33.580
MGP_129S1SvImJ_G0035068	Ddx43	59	31.771	MGP_129S1SvImJ_G0034714	Ddx6	77	31.771
MGP_129S1SvImJ_G0035068	Ddx43	60	40.000	MGP_129S1SvImJ_G0020938	Ddx4	56	40.000
MGP_129S1SvImJ_G0035068	Ddx43	57	40.310	MGP_129S1SvImJ_G0035571	Ddx3x	61	39.259
MGP_129S1SvImJ_G0035068	Ddx43	56	32.240	MGP_129S1SvImJ_G0022678	Eif4a2	91	31.398
MGP_129S1SvImJ_G0035068	Ddx43	59	35.678	MGP_129S1SvImJ_G0031412	Ddx47	91	34.218
MGP_129S1SvImJ_G0035068	Ddx43	52	31.287	MGP_129S1SvImJ_G0018546	Eif4a1	87	31.287
MGP_129S1SvImJ_G0035068	Ddx43	74	36.270	MGP_129S1SvImJ_G0019298	Ddx42	50	36.270
MGP_129S1SvImJ_G0035068	Ddx43	55	34.974	MGP_129S1SvImJ_G0016412	Ddx18	56	34.974