EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0035401 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 1119964 bases
Position: chr9:119165164-120285127
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0095112	RRM_1	PF00076.22	1.6e-32	1	2
MGP_129S1SvImJ_P0095112	RRM_1	PF00076.22	1.6e-32	2	2
MGP_129S1SvImJ_P0095109	RRM_1	PF00076.22	1.2e-31	1	2
MGP_129S1SvImJ_P0095109	RRM_1	PF00076.22	1.2e-31	2	2
MGP_129S1SvImJ_P0095106	RRM_1	PF00076.22	1.4e-31	1	2
MGP_129S1SvImJ_P0095106	RRM_1	PF00076.22	1.4e-31	2	2
MGP_129S1SvImJ_P0095104	RRM_1	PF00076.22	1.5e-31	1	2
MGP_129S1SvImJ_P0095104	RRM_1	PF00076.22	1.5e-31	2	2
MGP_129S1SvImJ_P0095108	RRM_1	PF00076.22	1.5e-31	1	2
MGP_129S1SvImJ_P0095108	RRM_1	PF00076.22	1.5e-31	2	2
MGP_129S1SvImJ_P0095103	RRM_1	PF00076.22	1.7e-31	1	2
MGP_129S1SvImJ_P0095103	RRM_1	PF00076.22	1.7e-31	2	2
MGP_129S1SvImJ_P0095107	RRM_1	PF00076.22	2e-31	1	2
MGP_129S1SvImJ_P0095107	RRM_1	PF00076.22	2e-31	2	2
MGP_129S1SvImJ_P0095110	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0095109	-	1983	-	MGP_129S1SvImJ_P0095109	386 (aa)	-	-
MGP_129S1SvImJ_T0095108	-	2243	-	MGP_129S1SvImJ_P0095108	415 (aa)	-	-
MGP_129S1SvImJ_T0095103	-	7917	XM_017313248	MGP_129S1SvImJ_P0095103	431 (aa)	XP_017168737	Q8BWL5
MGP_129S1SvImJ_T0095111	-	2027	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0095112	-	619	-	MGP_129S1SvImJ_P0095112	206 (aa)	-	-
MGP_129S1SvImJ_T0095113	-	1438	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0095107	-	2135	-	MGP_129S1SvImJ_P0095107	463 (aa)	-	-
MGP_129S1SvImJ_T0095106	-	2173	-	MGP_129S1SvImJ_P0095106	402 (aa)	-	-
MGP_129S1SvImJ_T0095105	-	1640	-	MGP_129S1SvImJ_P0095105	185 (aa)	-	-
MGP_129S1SvImJ_T0095104	-	3329	-	MGP_129S1SvImJ_P0095104	414 (aa)	-	-
MGP_129S1SvImJ_T0095110	-	585	-	MGP_129S1SvImJ_P0095110	194 (aa)	-	-
MGP_129S1SvImJ_T0095114	-	1754	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0035401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0035401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0035401	Rbms3	68	43.421	MGP_129S1SvImJ_G0026137	Celf1	53	43.421
MGP_129S1SvImJ_G0035401	Rbms3	99	80.841	MGP_129S1SvImJ_G0025764	Rbms1	96	71.538
MGP_129S1SvImJ_G0035401	Rbms3	82	42.105	MGP_129S1SvImJ_G0034902	Celf6	52	42.105
MGP_129S1SvImJ_G0035401	Rbms3	77	33.708	MGP_129S1SvImJ_G0023139	Pabpc6	60	34.091
MGP_129S1SvImJ_G0035401	Rbms3	83	37.097	MGP_129S1SvImJ_G0028576	Elavl4	70	36.458
MGP_129S1SvImJ_G0035401	Rbms3	81	39.474	MGP_129S1SvImJ_G0027553	Celf3	94	40.278
MGP_129S1SvImJ_G0035401	Rbms3	77	30.818	MGP_129S1SvImJ_G0026834	Pabpc1l	59	30.818
MGP_129S1SvImJ_G0035401	Rbms3	70	38.562	MGP_129S1SvImJ_G0034474	Elavl3	63	37.931
MGP_129S1SvImJ_G0035401	Rbms3	83	37.222	MGP_129S1SvImJ_G0028445	Elavl2	69	37.209
MGP_129S1SvImJ_G0035401	Rbms3	72	40.789	MGP_129S1SvImJ_G0024209	Celf4	68	40.789
MGP_129S1SvImJ_G0035401	Rbms3	83	80.663	MGP_129S1SvImJ_G0017849	Rbms2	86	66.758
MGP_129S1SvImJ_G0035401	Rbms3	75	37.079	MGP_129S1SvImJ_G0025332	Celf2	77	39.474
MGP_129S1SvImJ_G0035401	Rbms3	97	34.356	MGP_129S1SvImJ_G0033333	Elavl1	91	34.356