EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0035541 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Minus strand
Length: 7234 bases
Position: chrX:2785160-2792393
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0095594	RRM_1	PF00076.22	1.8e-24	1	1
MGP_129S1SvImJ_P0095593	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0095594	-	969	-	MGP_129S1SvImJ_P0095594	153 (aa)	-	-
MGP_129S1SvImJ_T0095595	-	1055	-	MGP_129S1SvImJ_P0095595	90 (aa)	-	-
MGP_129S1SvImJ_T0095596	-	1208	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0095597	-	721	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0095592	-	2234	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0095593	-	2792	-	MGP_129S1SvImJ_P0095593	154 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0035541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0035541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0035541	Rbm3	99	35.955	MGP_129S1SvImJ_G0030975	Tia1	70	41.333
MGP_129S1SvImJ_G0035541	Rbm3	82	38.710	MGP_129S1SvImJ_G0028576	Elavl4	58	31.646
MGP_129S1SvImJ_G0035541	Rbm3	73	33.333	MGP_129S1SvImJ_G0030097	Snrnp35	55	34.848
MGP_129S1SvImJ_G0035541	Rbm3	80	36.709	MGP_129S1SvImJ_G0029780	Hnrnpd	64	37.931
MGP_129S1SvImJ_G0035541	Rbm3	90	35.385	MGP_129S1SvImJ_G0027190	Pabpc4l	83	34.286
MGP_129S1SvImJ_G0035541	Rbm3	82	38.710	MGP_129S1SvImJ_G0028445	Elavl2	63	32.911
MGP_129S1SvImJ_G0035541	Rbm3	100	63.529	MGP_129S1SvImJ_G0017486	Cirbp	99	60.588
MGP_129S1SvImJ_G0035541	Rbm3	77	55.072	MGP_129S1SvImJ_G0033806	-	60	55.556
MGP_129S1SvImJ_G0035541	Rbm3	90	39.326	MGP_129S1SvImJ_G0017492	Dazap1	78	46.032
MGP_129S1SvImJ_G0035541	Rbm3	82	43.243	MGP_129S1SvImJ_G0018924	Msi2	61	42.857
MGP_129S1SvImJ_G0035541	Rbm3	74	40.000	MGP_129S1SvImJ_G0028739	Pabpc4	90	37.500
MGP_129S1SvImJ_G0035541	Rbm3	78	55.714	MGP_129S1SvImJ_G0035748	Rbmx	79	56.790