EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0035685 (Gene tree)
Gene ID: -
Gene Symbol: Ocrl
Alias: 9530014D17Rik|BB143339|OCRL1
Full Name: oculocerebrorenal syndrome of Lowe
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 53152 bases
Position: chrX:43031127-43084278
Accession: 109589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0096014	Exo_endo_phos	PF03372.23	3.3e-15	1	1
MGP_129S1SvImJ_P0096017	Exo_endo_phos	PF03372.23	4e-15	1	1
MGP_129S1SvImJ_P0096013	Exo_endo_phos	PF03372.23	4.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0096013	-	5253	XM_011251008	MGP_129S1SvImJ_P0096013	900 (aa)	XP_011249310	Q6NVF0
MGP_129S1SvImJ_T0096014	-	3210	-	MGP_129S1SvImJ_P0096014	727 (aa)	-	-
MGP_129S1SvImJ_T0096015	-	2930	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0096016	-	2839	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0096017	-	4953	-	MGP_129S1SvImJ_P0096017	887 (aa)	-	-
MGP_129S1SvImJ_T0096018	-	727	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0096019	-	799	-	MGP_129S1SvImJ_P0096019	265 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0035685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0035685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0035685	Ocrl	50	32.039	MGP_129S1SvImJ_G0023108	Synj2	58	32.653
MGP_129S1SvImJ_G0035685	Ocrl	82	51.578	MGP_129S1SvImJ_G0028753	Inpp5b	71	51.748