EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_129S1SvImJ_G0036060 (Gene tree)
Gene ID: -
Gene Symbol: Cstf2
Alias: C630034J23Rik|Cstf64|mir-3112
Full Name: cleavage stimulation factor%2C 3' pre-RNA subunit 2
Gene Type: protein_coding
Species: Mus_musculus_129s1svimj
Status: putative
Strand: Plus strand
Length: 28602 bases
Position: chrX:131207454-131236055
Accession: 1343054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_129S1SvImJ_P0097346	RRM_1	PF00076.22	2.4e-25	1	1
MGP_129S1SvImJ_P0097344	RRM_1	PF00076.22	2.7e-25	1	1
MGP_129S1SvImJ_P0097345	RRM_1	PF00076.22	2.9e-25	1	1
MGP_129S1SvImJ_P0097349	RRM_1	PF00076.22	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_129S1SvImJ_T0097349	-	552	-	MGP_129S1SvImJ_P0097349	184 (aa)	-	-
MGP_129S1SvImJ_T0097348	-	7494	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0097347	-	743	-	-	- (aa)	-	-
MGP_129S1SvImJ_T0097346	-	2717	-	MGP_129S1SvImJ_P0097346	510 (aa)	-	-
MGP_129S1SvImJ_T0097345	-	4502	-	MGP_129S1SvImJ_P0097345	580 (aa)	-	-
MGP_129S1SvImJ_T0097344	-	3661	XM_006528478	MGP_129S1SvImJ_P0097344	554 (aa)	XP_006528541	Q8BIQ5
MGP_129S1SvImJ_T0097350	-	775	-	MGP_129S1SvImJ_P0097350	258 (aa)	-	-
MGP_129S1SvImJ_T0097351	-	574	-	MGP_129S1SvImJ_P0097351	191 (aa)	-	-

Gene Model

Click here to download MGP_129S1SvImJ_G0036060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_129S1SvImJ_G0036060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_129S1SvImJ_G0036060	Cstf2	86	87.342	MGP_129S1SvImJ_G0025036	Cstf2t	99	63.927