EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0015886 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 22556 bases
Position: chr1:31318016-31340571
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0019170	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_AJ_P0019174	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0019169	-	2557	-	-	- (aa)	-	-
MGP_AJ_T0019168	-	444	-	-	- (aa)	-	-
MGP_AJ_T0019174	-	4218	-	MGP_AJ_P0019174	237 (aa)	-	-
MGP_AJ_T0019175	-	1966	-	-	- (aa)	-	-
MGP_AJ_T0019176	-	437	-	-	- (aa)	-	-
MGP_AJ_T0019177	-	1764	-	-	- (aa)	-	-
MGP_AJ_T0019170	-	4322	-	MGP_AJ_P0019170	237 (aa)	-	-
MGP_AJ_T0019171	-	4398	-	MGP_AJ_P0019171	64 (aa)	-	-
MGP_AJ_T0019172	-	2047	-	-	- (aa)	-	-
MGP_AJ_T0019173	-	1087	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0015886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0015886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0015886	Rab23	69	35.119	MGP_AJ_G0023946	Rab12	57	35.119
MGP_AJ_G0015886	Rab23	74	37.500	MGP_AJ_G0032488	Rab30	87	37.500
MGP_AJ_G0015886	Rab23	85	31.683	MGP_AJ_G0027364	Rab25	92	31.683
MGP_AJ_G0015886	Rab23	77	38.172	MGP_AJ_G0017327	Rab36	69	38.172
MGP_AJ_G0015886	Rab23	65	31.410	MGP_AJ_G0031454	Kras	94	32.778
MGP_AJ_G0015886	Rab23	72	34.682	MGP_AJ_G0019824	Rab15	81	34.682
MGP_AJ_G0015886	Rab23	70	34.337	MGP_AJ_G0025627	Rab14	88	35.338
MGP_AJ_G0015886	Rab23	80	32.984	MGP_AJ_G0034923	Rab11a	92	34.752
MGP_AJ_G0015886	Rab23	74	35.227	MGP_AJ_G0019135	Rab5c	81	35.227
MGP_AJ_G0015886	Rab23	65	36.538	MGP_AJ_G0035849	Rab39b	73	36.538
MGP_AJ_G0015886	Rab23	67	35.152	MGP_AJ_G0027158	Rab33b	72	35.152
MGP_AJ_G0015886	Rab23	70	33.918	MGP_AJ_G0030971	Rab7	94	43.478
MGP_AJ_G0015886	Rab23	66	39.873	MGP_AJ_G0032548	Rab6a	76	39.873
MGP_AJ_G0015886	Rab23	67	31.765	MGP_AJ_G0030353	Rasl11a	69	31.765
MGP_AJ_G0015886	Rab23	61	31.507	MGP_AJ_G0033196	Hras	98	30.332
MGP_AJ_G0015886	Rab23	64	38.462	MGP_AJ_G0018734	Rab34	60	38.462
MGP_AJ_G0015886	Rab23	65	34.375	MGP_AJ_G0036235	Rab9	79	34.375
MGP_AJ_G0015886	Rab23	72	35.465	MGP_AJ_G0024094	Rab18	83	35.465
MGP_AJ_G0015886	Rab23	65	33.766	MGP_AJ_G0026926	Rab22a	79	33.766
MGP_AJ_G0015886	Rab23	77	31.383	MGP_AJ_G0035677	Rab33a	79	31.383
MGP_AJ_G0015886	Rab23	65	36.129	MGP_AJ_G0029322	Rheb	84	36.129
MGP_AJ_G0015886	Rab23	70	34.337	MGP_AJ_G0024659	Rab1b	83	34.337
MGP_AJ_G0015886	Rab23	83	32.487	MGP_AJ_G0027997	Rab2a	95	31.863
MGP_AJ_G0015886	Rab23	66	41.139	MGP_AJ_G0035173	Rab6b	76	41.139
MGP_AJ_G0015886	Rab23	75	32.086	MGP_AJ_G0029599	Rasl11b	74	32.086
MGP_AJ_G0015886	Rab23	80	30.890	MGP_AJ_G0023937	Rab31	93	30.890
MGP_AJ_G0015886	Rab23	68	33.129	MGP_AJ_G0031560	Rasl2-9	74	33.129
MGP_AJ_G0015886	Rab23	86	32.850	MGP_AJ_G0021251	Rab2b	94	32.850
MGP_AJ_G0015886	Rab23	66	37.654	MGP_AJ_G0036087	Rab9b	80	37.654
MGP_AJ_G0015886	Rab23	70	34.337	MGP_AJ_G0018037	Rab1a	81	34.337
MGP_AJ_G0015886	Rab23	67	38.125	MGP_AJ_G0023847	Rab5a	74	38.125
MGP_AJ_G0015886	Rab23	61	32.192	MGP_AJ_G0027648	Nras	95	35.862
MGP_AJ_G0015886	Rab23	75	32.961	MGP_AJ_G0019340	Rab37	81	32.961
MGP_AJ_G0015886	Rab23	80	33.508	MGP_AJ_G0023494	Rab11b	88	33.508
MGP_AJ_G0015886	Rab23	75	34.831	MGP_AJ_G0029939	Rab35	95	33.684